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. Author manuscript; available in PMC: 2017 Apr 20.
Published in final edited form as: J Phys Chem B. 2016 Nov 11;121(15):3473–3482. doi: 10.1021/acs.jpcb.6b09347

Figure 2.

Figure 2

A summary of the prediction results for 5 α/β Proteins. Only the predictions with highest Q value are reported here. From left to right are: Ubiquitin (PDB ID: 1UBQ), T089 (PDB ID: 1E4F), TOP7 (PDB ID: 1QYS), T251 (PDB ID: 1XG8) and T120 (PDB ID: 1FU1). Q is used as an evaluation metrics. The maximum Q values in each prediction runs were plotted against the sequence length of each of the five proteins. The red star represents a structure prediction for 1UBQ using AWSEM that allowed for the presence of homologues. Simulations using homologues only are typically of higher quality still.