Table 5. The distribution of B. multivorans versus B. cenocepacia CDS varies among COG categories.
| B. cenocepacia | B. multivorans | ||||
|---|---|---|---|---|---|
| Information storage and processing | |||||
| J | Translation, ribosomal structure and biogenesis | − | 1528 (-2.166) | 2118 (1.931) | |
| K | Transcription | + | 4314 (3.883) | − | 4866 (-3.462) |
| L | Replication, recombination and repair | − | 809 (-2.797) | + | 1206 (2.494) |
| B | Chromatin structure and dynamics | 21 (-0.057) | 27 (0.051) | ||
| Cellular processes and signaling | |||||
| D | Cell cycle control, cell division, chromosome partitioning | 261 (-1.082) | 369 (0.964) | ||
| V | Defense mechanisms | + | 800 (2.046) | 880 (-1.825) | |
| T | Signal transduction mechanisms | 2032 (0.726) | 2482 (-0.647) | ||
| M | Cell wall/membrane/envelope biogenesis | 2438 (0.658) | 2993 (-0.587) | ||
| N | Cell motility | 715 (-1.808) | 1012 (1.612) | ||
| W | Extracellular structures | 226 (0.949) | 253 (-0.846) | ||
| U | Intracellular trafficking, secretion, and vesicular transport | 750 (-1.798) | 1058 (1.603) | ||
| O | Posttranslational modification, protein turnover, chaperones | 1251 (-0.421) | 1607 (0.376) | ||
| Metabolism | |||||
| C | Energy production and conversion | 2357 (-1.677) | 3151 (1.496) | ||
| G | Carbohydrate transport and metabolism | 2519 (0.619) | 3098 (-0.552) | ||
| E | Amino acid transport and metabolism | 3694 (-1.403) | 4840 (1.251) | ||
| F | Nucleotide transport and metabolism | 747 (-0.603) | 977 (0.538) | ||
| H | Coenzyme transport and metabolism | 1854 (-0.344) | 2364 (0.297) | ||
| I | Lipid transport and metabolism | 2090 (1.130) | 2513 (-1.008) | ||
| P | Inorganic ion transport and metabolism | 1883 (-1.820) | 2550 (1.623) | ||
| Q | Secondary metabolites biosynthesis, transport and catabolism | 1367 (0.495) | 1678 (-0.441) | ||
| Poorly characterized | |||||
| R | General function prediction only | + | 3843 (1.965) | 4562 (-1.752) | |
| S | Function unknown | 1685 (-0.887) | 2202 (0.791) | ||
| Mobile elements | |||||
| X | Mobilome: prophages, transposons | 630 (0.830) | 746 (-0.740) | ||
Pearson chi-square analysis testing the independence of species and COG category (X2(22) = 102.9, p<0.001). Each cell in the contingency represents the observed frequency and standardized residual (in between brackets) and is preceded by + or − if the standardized residual is >1.96 or <-1.96, respectively, and significant at p<0.05.