Table 2. The distribution of SNPs in the functional elements.
| Mean density (SNP/kb) | Mean spacing (bp/SNP) | SNP count (SNP) | Total length (bp) | |
|---|---|---|---|---|
| Promoter | 3.269 | 305.882 | 133 327 | 40 782 381 |
| CpG | 2.956 | 338.278 | 56 829 | 19 223 987 |
| 5′-UTR | 3.233 | 309.317 | 13 997 | 4 329 509 |
| Start codon | 1.119 | 894.042 | 71 | 63 477 |
| Splice site | 1.326 | 754.223 | 1 067 | 804 756 |
| Coding exon | 2.453 | 407.634 | 81 963 | 33 410 932 |
| Intron | 2.847 | 351.230 | 3 264 275 | 1 146 509 847 |
| Stop codon | 1.985 | 503.786 | 126 | 63 477 |
| PAS | 2.105 | 475.034 | 87 | 41 328 |
| 3′-UTR | 3.841 | 260.373 | 73 638 | 19 173 314 |