Table 3. The density of SNPs in the gene region by chromosome.
Promoter | CpG | 5′-UTR | Start | Splice | Exon | Intron | Stop | PAS | 3′-UTR | |
---|---|---|---|---|---|---|---|---|---|---|
Chr1 | 3.051 | 2.790 | 3.196 | 1.112 | 1.183 | 2.325 | 2.710 | 1.906 | 1.195 | 3.780 |
Chr2 | 2.506 | 2.336 | 2.521 | 1.705 | 0.507 | 1.824 | 2.235 | 2.436 | 2.419 | 3.395 |
Chr3 | 2.673 | 2.437 | 3.103 | 1.123 | 0.970 | 2.052 | 2.523 | 1.404 | 1.827 | 3.343 |
Chr4 | 2.817 | 2.545 | 2.858 | 0.430 | 0.675 | 1.959 | 2.294 | 1.291 | 2.639 | 3.032 |
Chr5 | 2.804 | 2.837 | 3.001 | 0 | 0.481 | 2.016 | 2.423 | 0.676 | 1.610 | 3.247 |
Chr6 | 3.756 | 3.576 | 3.581 | 0.904 | 1.177 | 2.651 | 3.012 | 2.111 | 4.284 | 4.126 |
Chr7 | 5.030 | 5.071 | 5.767 | 4.462 | 3.590 | 4.717 | 4.861 | 3.432 | 5.078 | 6.337 |
Chr8 | 3.075 | 2.817 | 3.606 | 1.801 | 0.926 | 2.343 | 2.537 | 0.900 | 1.996 | 3.388 |
Chr9 | 3.331 | 3.057 | 3.291 | 0.834 | 1.422 | 2.340 | 3.063 | 0.834 | 0 | 3.644 |
Chr10 | 3.308 | 3.271 | 3.514 | 0.805 | 1.024 | 2.638 | 3.173 | 1.610 | 0.874 | 3.844 |
Chr11 | 3.354 | 3.270 | 3.565 | 1.112 | 1.291 | 2.581 | 3.086 | 3.338 | 4.079 | 3.980 |
Chr12 | 3.101 | 2.831 | 3.089 | 0.894 | 1.203 | 2.211 | 2.890 | 1.788 | 3.875 | 3.989 |
Chr13 | 3.265 | 2.939 | 2.975 | 0.960 | 0.592 | 2.072 | 2.944 | 0 | 3.100 | 3.263 |
Chr14 | 2.901 | 2.658 | 2.791 | 0.516 | 1.016 | 1.944 | 2.416 | 1.550 | 1.494 | 3.460 |
Chr15 | 2.501 | 2.212 | 2.357 | 0 | 0.769 | 2.102 | 2.375 | 2.683 | 0.931 | 3.450 |
Chr16 | 3.097 | 2.751 | 2.747 | 0 | 1.062 | 2.540 | 3.212 | 1.114 | 0 | 3.530 |
Chr17 | 4.588 | 2.513 | 2.784 | 0.792 | 1.360 | 2.384 | 2.532 | 2.377 | 0.837 | 4.013 |
Chr18 | 3.112 | 3.149 | 2.743 | 3.300 | 1.272 | 2.244 | 2.632 | 0 | 3.067 | 3.432 |
Chr19 | 3.106 | 2.850 | 3.382 | 1.216 | 1.313 | 2.865 | 2.825 | 2.433 | 1.048 | 4.250 |
Chr20 | 4.160 | 3.835 | 4.067 | 0.917 | 5.198 | 3.487 | 4.167 | 3.668 | 0.793 | 5.137 |
Chr21 | 3.709 | 2.999 | 2.691 | 1.082 | 1.291 | 2.982 | 4.065 | 2.164 | 0 | 4.329 |
Chr22 | 4.178 | 3.956 | 4.304 | 0.649 | 2.489 | 3.339 | 3.969 | 4.548 | 0 | 5.160 |
ChrX | 2.145 | 1.853 | 2.251 | 1.481 | 1.259 | 1.780 | 1.822 | 1.481 | 1.644 | 2.614 |
ChrY | 2.491 | 2.514 | 1.857 | 0 | 1.396 | 2.442 | 1.424 | 0 | 0 | 3.479 |