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. 2017 Jan 12;34(4):857–872. doi: 10.1093/molbev/msw285

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© The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 2. — (A) The proportion of each family of immune-related genes that are upregulated (at a 5% FDR, based on DESeq2 analysis) after infection relative to uninfected control (sterile wounded) at 6-h post-treatment in Musca domestica. Families are defined based on HMM profiles and ordered by category (recognition, signaling, effector) and proportion induced within each category. (B) The proportion of the each family of immune-related genes that are upregulated (at a 5% FDR, based on DESeq2 analysis) after infection relative to an uninfected control (naive, untreated) at 12-h post-treatment in D. melanogaster. Families are defined and ordered as in part A.