Table 1.
Immune-Related Gene Families Annotated by Hidden Markov Models.
| Short Name | Description | Class |
|---|---|---|
| ATT | Attacin antimicrobial peptides | Effector |
| CEC | Cecropin antimicrobial peptides | Effector |
| DEF | Defensin antimicrobial peptides | Effector |
| DIPT | Diptericin antimicrobial peptides | Effector |
| GPX | Glutathione peroxidases | Effector |
| HPX | Heme peroxidases | Effector |
| LYS | Lysozymes | Effector |
| PPO | Prophenoloxidases | Effector |
| TPX | Thioredoxin peroxidases | Effector |
| TSF | Transferrins | Effector |
| BGBP | β-glucan binding proteins (GNBPs in Drosophila) | Recognition |
| CTL | C-type lectins | Recognition |
| FREP | Fibrinogen-related proteins | Recognition |
| GALE | Galectins | Recognition |
| IGSF | Ig superfamily proteins | Recognition |
| MD2L | MD2-like proteins | Recognition |
| NIM | Nimrods | Recognition |
| PGRP | Peptidoglycan recognition proteins | Recognition |
| SRCA | Scavenger receptor class A | Recognition |
| SRCB | Scavenger receptor class B | Recognition |
| SRCC | Scavenger receptor class C | Recognition |
| TEP | Thioester-containing proteins | Recognition |
| CLIPA | CLIP-domain serine protease class A | Signaling |
| CLIPB | CLIP-domain serine protease class B | Signaling |
| CLIPC | CLIP-domain serine protease class C | Signaling |
| CLIPD | CLIP-domain serine protease class D | Signaling |
| CLIPE | CLIP-domain serine protease class E | Signaling |
| NFKB | Nf-κB proteins | Signaling |
| SPRN | Serine protease inhibitors | Signaling |
| TLL | Toll family proteins | Signaling |