Table 2. Genotype counts and frequencies in Super-Seniors and controls.
Super-Seniors | Controls | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Gene | ID | Alleles* | MAF in study | MAF in 1000 Genomes | GRGh38 genomic location | Homo major allele | Het | Homo minor allele | Homo major allele | Het | Homo minor allele |
ADIPOQ | rs56354395 | A>del | 0.370 | 0.499 | 3:186855076/5 | 182 | 212 | 54 | 159 | 192 | 63 |
APOA1 | rs670 | C>T | 0.158 | 0.188 | 11:116837697 | 308 | 123 | 8 | 283 | 110 | 8 |
APOC3 | rs595049 | T>G | 0.345 | 0.498 | 11:116828729 | 204 | 196 | 59 | 176 | 191 | 50 |
APOE | APOEε4 | ε2/ ε3>ε4 | 0.128 | 365 | 84 | 4 | 293 | 109 | 10 | ||
CETP | rs5882 | T>C | 0.304 | 0.466 | 16:56982180 | 209 | 190 | 44 | 198 | 171 | 32 |
CRYL1 | rs7989332 | G>T | 0.261 | 0.222 | 13:20476436 | 249 | 179 | 30 | 224 | 169 | 24 |
FOXO1 | rs2701858 | G>A | 0.065 | 0.108 | 13:40564252 | 388 | 63 | 2 | 371 | 41 | 2 |
FOXO3 | rs9486902 | C>T | 0.142 | 0.174 | 6:108556849 | 341 | 100 | 13 | 305 | 97 | 12 |
FOXO3 | rs2802292 | A>C | 0.366 | 0.469 | 6:108587315 | 162 | 226 | 55 | 166 | 189 | 47 |
HFE | rs1800562 | C>T | 0.067 | 0.013 | 6:26092913 | 394 | 64 | 1 | 367 | 49 | 1 |
HP | rs72294371 | HP2>HP1 | 0.448 | 126 | 199 | 99 | 123 | 202 | 63 | ||
KHDRBS2 | rs6455128 | C>A | 0.178 | 0.219 | 6:61987841 | 321 | 117 | 21 | 279 | 122 | 16 |
KL | rs9536314 | T>G | 0.163 | 0.130 | 13:33054001 | 334 | 114 | 11 | 283 | 116 | 17 |
LPA | rs1853021 | C>T | 0.152 | n/a | 6:160664263 | 324 | 119 | 9 | 303 | 96 | 15 |
LPA | rs3798220 | T>C | 0.017 | 0.051 | 6:160540105 | 445 | 14 | 0 | 402 | 15 | 0 |
LPA | rs10455872 | T>C | 0.070 | 0.022 | 6:160589086 | 403 | 54 | 2 | 357 | 56 | 4 |
MTTP | rs2866164 | C>G | 0.256 | 0.250 | 4:99569786 | 234 | 168 | 30 | 229 | 137 | 29 |
PON1 | rs662 | A>G | 0.284 | 0.457 | 7:95308134 | 228 | 177 | 38 | 212 | 151 | 37 |
*Major allele > minor allele. Minor allele frequency (MAF) was calculated from the entire study population.