TABLE 1.
ASFV isolates used in testing specificity of the ASFV real-time PCR
| p72 sequence source and isolate | Source | Yr of isolation | Species of origin | GenBank accession no. |
|---|---|---|---|---|
| GenBank | ||||
| Uganda'65 | Uganda | 1965 | Pig | L27499 |
| E-70 | Spain | 1970 | Pig | S89966 |
| BA-71V | Spain | 1971 | Pig | U18466 |
| DR-1 (nh)a | Dominican Rep. | 1979 | Pig | L27498 |
| DR-2 (nh) | Dominican Rep. | 1979 | Pig | L76727 |
| Malawi Lil-20/1 | Malawi | 1983 | Tick | L00966 |
| This study | ||||
| TEN | Tengani, Malawi | 1962 | Pig | AY578704 |
| KER | Kerita, Kenya | 1964 | Pig | AY578697 |
| KN | Kenya | 1966 | Pig | AY578698 |
| ZA | Zaire | 1967 | Pig | AY578708 |
| CAM | Cameroon | 1982 | Pig | AY578689 |
| VIC | Victoria Falls, Zimbabwe | 1983 | Pig | AY578705 |
| E-70 | Spain | 1970 | Pig | AY578692 |
| E-75 | Spain | 1975 | Pig | AY578693 |
| HT (nh) | Haiti | 1979 | Pig | AY578695 |
| WART | Namibia | 1980 | Warthog | AY578706 |
| MK | Mkuzi, RSAb | 1978 | Tick | AY578700 |
| WB | Warmbaths, RSA | 1987 | Tick | AY578707 |
| PR-4 | Pretoriuskop, RSA | 1996 | Tick | AY578702 |
| PR-5 | Pretoriuskop, RSA | 1996 | Tick | AY578703 |
| M1 | Wildebeeslagte, RSA | 1996 | Tick | AY578699 |
| K1 | Fairfield, RSA | 1996 | Tick | AY578696 |
| O1 | Noord Biabant, RSA | 1996 | Tick | AY578701 |
| F6 | Nooitverwacht, RSA | 1996 | Tick | AY578694 |
| CRO-1.2 | Crocodile, RSA | 1996 | Tick | AY578690 |
| CRO-3.5 | Crocodile, RSA | 1996 | Tick | AY578691 |
| No sequence available | ||||
| SPENCER | RSA | 1951 | Pig | |
| KILLEAN-III | RSA | 1964 | Pig | |
| DAKAR | Dakar, Senegal | 1959 | Pig | |
| LA GRANJA | Spain | 1963 | Pig | |
| KITALI | Kenya | 1964 | Pig | |
| KIMAKIA | Kenya | 1964 | Pig | |
| L-60 | Lisbon, Portugal | 1960 | Pig | |
| SALA | Salamanca, Spain | 1963 | Pig | |
| MAD | Madrid, Spain | 1980 | Pig | |
| SOUCHE | France | 1964 | Pig | |
| CUBA | Cuba | 1979 | Pig | |
| BRAZIL | Brazil | 1978 | Pig | |
| HINDE-II | Kenya | 1954 | Warthog | |
| UGANDA'61 | West Province, Uganda | 1961 | Warthog | |
| RSA-W1 | RSA | 1999 | Warthog | |
| LEE | Kenya | 1955 | Bushpig | |
| GR-1 | RSA | 1981 | Tick | |
| GR-4 | RSA | 1979 | Tick | |
| ZIM | Zimbabwe | 1983 | Tick | |
| CHI | Chiredzi, Kenya | 1983 | Tick | |
| MM1 | Masa Mari, Kenya | 1996 | Tick | |
| JACOBSLOOP/B | North Province, RSA | 1996 | Tick |
a
Nonhemadsorbing ASFV isolate.
b
RSA, Republic of South Africa.