TABLE 1.
spa types of consecutive S. aureus strains from the airways of individual CF patients
Patienta | spa typeb | Repeatsc | No. of isolatesd | Commentse |
---|---|---|---|---|
1 | 8 | r11r19r12r21r17r34r24r34r22r25 | 6 | |
2 | 15 | r08r16r02r16r34r13r17r34r16r34 | 12 | Ancestor |
50 | r08r16r02r16r34r34r17r34r16r34 | 3 | pm, AAC to AAA, (Asp-Lys) at pos 6 | |
3 | 71 | r26r23r23r17r34r17r20r17r12r17r16 | 10 | Ancestor |
2 | r26r23r17r34r17r20r17r12r17r16 | 1 | del of r23 at pos 3 | |
72 | r26r23r23r17r12r17r16 | 2 | del of r34r17r20r17 at pos 5 | |
4 | 154 | r04r44r33r31r12r16r34r22r17r25r22r22r34 | 10 | |
5 | 84 | r07r23r12r34r34r12r12r23r02r12r23 | 11 | Ancestor |
85 | r07r23r12r34r34r12r23r02r12r23 | 1 | del of r12 at pos 7 | |
6 | 80 | r09r02r16r34r42r17r16r34 | 11 | |
7 | 91 | r07r23r21r17r34r12r23r02r12r23 | 24 | Ancestor |
250 | r07r16r23r21r17r34r12r23r02r12r23 | 1 | dupl with pm at pos 2, GGC to GGG (Gly-Gly) | |
8 | 78 | r04r21r12r41r20r17r12r12r17 | 18 | Ancestor |
87 | r04r21r12r41r20r17r12r12r17r17 | 1 | dupl of r17 at pos 10 | |
79 | r04r21r12r41 | 5 | del of r20r17r12r12r17 at pos 5 | |
9 | 9 | r11r12r21r17r34r24r34r22r24r34r22r33r25 | 15 | |
10 | 91 | r07r23r21r17r34r12r23r02r12r23 | 11 |
Individual CF patients.
Numerical spa types.
Repeats of the respective spa types.
Number of isolates that were sequenced and were found to display the different spa types.
pm, point mutation; del, deletion; pos, position of the repeat; dupl, duplication.