TABLE 2.
Tms for CYP51A molecular beacons
Tma at Mg concn of:
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Beacon | 3 mM for target:
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5 mM for target:
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GGG-T | GAA-T | AAG-T | GAG-T | AGG-T | GTG-T | TGG-T | CGG-T | GGG-T | GAA-T | AAG-T | GAG-T | AGG-T | GTG-T | TGG-T | CGG-T | |
AAG-FAM | 48.7 | 44.7 | 62.2 | 52.7 | 53.2 | 48.2 | 50.7 | 49.7 | 49.7 | 45.2 | 63.7 | 54.2 | 54.7 | 54.2 | 52.2 | 52.2 |
GGG-FAM | 65.2 | 53.7 | 54.2 | 58.7 | 59.7 | 61.7 | 58.2 | 55.7 | 67.2 | 55.2 | 55.7 | 61.2 | 61.7 | 63.7 | 61.2 | 59.7 |
GAA-HEX | 45.7 | 61.2 | 41.7 | 50.2 | 35.2 | 45.2 | 41.7 | 36.2 | 46.7 | 63.7 | 47.7 | 52.7 | 41.2 | 46.7 | 42.2 | 41.7 |
AAG-HEX | 46.2 | 39.7 | 61.2 | 52.2 | 51.7 | 49.7 | 48.2 | 47.2 | 48.7 | 44.7 | 63.2 | 53.2 | 53.2 | 51.2 | 50.7 | 49.7 |
GAG-HEX | 55.7 | 55.7 | 56.7 | 63.2 | 50.2 | 57.7 | 50.7 | 50.7 | 57.2 | 56.2 | 57.2 | 64.2 | 51.7 | 58.7 | 52.7 | 52.2 |
AGG-HEX | 54.7 | 42.2 | 55.2 | 49.7 | 61.7 | 49.7 | 56.2 | 58.2 | 56.7 | 44.7 | 57.2 | 51.7 | 63.7 | 52.2 | 58.2 | 59.7 |
GTG-HEX | 54.7 | 47.7 | 48.7 | 54.7 | 49.7 | 63.7 | 51.7 | 49.7 | 56.2 | 48.7 | 51.2 | 57.2 | 50.7 | 65.2 | 53.7 | 52.2 |
TGG-HEX | 56.2 | 47.2 | 53.7 | 52.7 | 58.7 | 53.7 | 63.7 | 60.2 | 57.7 | 48.2 | 54.7 | 53.2 | 59.7 | 55.2 | 65.2 | 61.7 |
CGG-HEX | 54.7 | 40.7 | 47.7 | 48.2 | 54.2 | 50.2 | 54.7 | 65.2 | 55.2 | 42.7 | 49.2 | 50.2 | 55.2 | 51.7 | 57.2 | 66.2 |
TGG-ROX | 52.7 | 39.2 | 49.7 | 46.2 | 56.2 | 48.2 | 62.7 | 58.2 | 54.2 | 39.7 | 51.2 | 49.2 | 57.7 | 50.2 | 63.7 | 59.7 |
CGG-ROX | 52.7 | 40.7 | 47.7 | 46.7 | 53.7 | 49.7 | 53.2 | 64.2 | 54.2 | 42.2 | 48.7 | 49.7 | 54.7 | 51.2 | 55.2 | 65.7 |
GAA-Q670 | 42.2 | 58.2 | 42.7 | 48.7 | 39.7 | 42.7 | 39.2 | 41.2 | 46.7 | 61.7 | 42.7 | 51.2 | 40.2 | 48.2 | 44.7 | 43.2 |
GTG-Q670 | 44.7 | 46.2 | 47.7 | 55.2 | 42.7 | 61.2 | 49.7 | 48.2 | 49.7 | 48.2 | 50.2 | 56.2 | 49.2 | 64.2 | 51.7 | 50.2 |
Tms of complement molecular beacon-target hybrids are in boldface.