Table 1.
Primer Name | Use | Primer Sequence (5′–3′) |
---|---|---|
HIF1-Forward | PCR | AGGAGGGGGAAGGAATCTGAGGT |
HIF1-Reverse | PCR | ACAACACACTGGGGCTGGGAG |
AP-1 | RACE | CCATCCTAATACGACTCACTATAGGGC |
AP-2 | RACE | ACTCACTATAGGGCTCGAGCGGC |
HIF1 5′gs outer | RACE | GTCTCCGTCTTCAGACAGCACCAG |
HIF1 5′gs inner | RACE | AGCTGCATGTCCAGAGCTGGTTTG |
HIF1 5′gs alt | RACE | CTCTAAAGCCTTCAGGTAGGAGCC |
HIF1 3′gs outer | RACE | CGGAGGACCTGCTGAACCGGTCTG |
HIF1 3′gs inner | RACE | CAAAGACTCACCATCACTTGTTTG |
HIF1 3′gs alt | RACE | ACCACGCTCTGGACTCGGACTATC |
HIF3 5′gs outer | RACE | ACAGGGGTTCGGTTTTGGGTAG |
HIF3 5′gs inner | RACE | TGTTGTTGTAGAGGACGGTGGC |
HIF3 3′gs outer | RACE | TGACCTTCCTCAGCGATTTGC |
HIF3 3′gs inner | RACE | AAGCAAGAGCCGTCCTCCATAG |
HIF1 5′UTR | PCR | GAACCCAGGAGGAACTCTTATGTG |
HIF1 3′UTR | PCR | TAAATAAGTGGCAGTGGGGTC |
HIF3 5′UTR | PCR | AACAGAGAGCCTTGGATTTGGTGTTC |
HIF3 3′UTR | PCR | GGCGAGGATCTTTTGTGCGTACAG |
HIF2 5′subclone | Ab production | TTCACTGCAGAGCCCAGGTGATTACTACAGC |
HIF2 3′subclone | Ab production | TTCAGTCGACCCTCTGTCGGGTGTCCACAG |
HIF3 5′subclone | Ab production | TTCACTGCAGTTCCAGCTGACCTTCCTCAGC |
HIF3 3′subclone | Ab production | TTCAGTCGACGAAGATGTCCCTCATCAGAGCTG |
HIF1-F1 | QPCR | CAAGTCGGCTACGTGGAAGGTG |
HIF1-R1 | QPCR | CAGATCAGGACCAGATAGGGGAC |
HIF2-F1 | QPCR | GGCTTCATCACCGTGGTAACATC |
HIF2-R1 | QPCR | CTGTGACCTGTGAGCTCCACCTG |
HIF3-F1 | QPCR | GTCAACAAGCACATCGGCATCACG |
HIF3-R1 | QPCR | CCATCAGTTTCTTACTCAGACCTGG |
Italicized bases indicate restriction enzyme sites included for subcloning.