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. 2003 Nov;15(11):2497–2502. doi: 10.1105/tpc.151140

Table 1.

Summary of the AtBHLH Genes Detected

Species a Generic
Name		 AGI Gene
Code		 Entry
Number b 		Synonym(s) Accession
Number c 		Referenced
At BHLH001 At5g41315 31 GL3 AF246291 Payne et al., 2000
At BHLH002 At1g63650 30 EGL1/EGL3/AtMYC146 AF027732 Zhang et al., 2003
At BHLH003 At4g16430 34 AF251688
At BHLH004 At4g17880 37 AtMYC4 AF251689 Abe et al., 2003
At BHLH005 At5g46760 36 ATR2/AtMYC3 AF251690 Smolen et al., 2002
At BHLH006 At1g32640 38 AtMYC2/RAP1 X99548 Abe et al., 2003
At BHLH007 At1g03040 92 AF251692
At BHLH008 At1g09530 100 PIF3 AF251693 Ni et al., 1998
At BHLH009 At2g43010 102 PIF4 AF251694 Huq and Quail, 2002
At BHLH010 At2g31220 23 AF251695
At BHLH011 At4g36060 137 AF251696
At BHLH012 At4g00480 58 AtMYC1 AF251697 Urao et al., 1996
At BHLH013 At1g01260 39 Myc7E AY120752 GenBank entrye
At BHLH014 At4g00870 33 AJ519812
At BHLH015 At2g20180 101 PIL5 AF488560 Yamashino et al., 2003
At BHLH016 At4g00050 108 AF488561
At BHLH017 At2g46510 35 AY094399
At BHLH018 At2g22750 28 AF488562
At BHLH019 At2g22760 26 AF488563
At BHLH020 At2g22770 27 AF488564
At BHLH021 At2g16910 48 AMS AF488565 Sorensen et al., 2003
At BHLH022 At4g21330 49 NM_118253
At BHLH023 At4g28790 107 AF488566
At BHLH024 At4g36930 99 SPATULA AF319540 Heisler et al., 2001
At BHLH025 At4g37850 29 AF488567
At BHLH026 At1g02340 68 HFR1 AF488568 Fairchild et al., 2000
At BHLH027 At4g29930 42 AF488569
At BHLH028 At5g46830 40 AF252636
At BHLH029 At2g28160 43 AF488570
At BHLH030 At1g68810 53 AY072161
At BHLH031 At1g59640 88 ZCW32 AB028232 GenBank entrye
At BHLH032 At3g25710 54 AF488571
At BHLH033 At1g12860 44 AF488572
At BHLH034 At3g23210 135 AF488573
At BHLH035 At5g57150 41 AF488574
At BHLH036 At5g51780 6 AF488575
At BHLH037 At3g50330 117 NM_114893
At BHLH038 At3g56970 8 ORG2 AF488576 Kang et al., 2003
At BHLH039 At3g56980 9 ORG3 AF488577 Kang et al., 2003
At BHLH040 At4g00120 120 AF488578
At BHLH041 At5g56960 51 NM_125078
At BHLH042 At4g09820 32 TT8 AJ277509 Nesi et al., 2000
At BHLH043 At5g09750 119 NM_121012
At BHLH044 At1g18400 77 BEE1 AF488579 Friedrichsen et al., 2002
At BHLH045 At3g06120 20 AF488580
At BHLH046 At5g08130 126 AF488581
At BHLH047 At3g47640 139 AF488582
At BHLH048 At2g42300 97 AF488583
At BHLH049 At1g68920 82 AF488584
At BHLH050 At1g73830 76 BEE3 AF488585 Friedrichsen et al., 2002
At BHLH059 At4g02590 93 AF488592
At BHLH060 At3g57800 91 AF488593
At BHLH061 At5g10570 46 AF488594
At BHLH062 At3g07340 85 AF488595
At BHLH063 At4g34530 84 AF488596
At BHLH064 At2g18300 79 AF488597
At BHLH065 At3g59060 103 PIL6 AF488598 Yamashino et al., 2003
At BHLH066 At2g24260 95 AF488599
At BHLH067 At3g61950 11 AF488600
At BHLH068 At4g29100 60 AF488634
At BHLH069 At4g30980 94 AF488601
At BHLH070 At2g46810 13 AF488602
At BHLH071 At5g46690 17 AF488603
At BHLH072 At5g61270 109 AF488604
At BHLH073 At5g67110 98 ALCATRAZ AF488605 Rajani and Sundaresan, 2001
At BHLH074 At1g10120 90 AF488606
At BHLH075 At1g25330 78 AF488607
At BHLH076 At1g26260 83 AF488608
At BHLH077 At3g23690 87 AF488609
At BHLH078 At5g48560 86 AF488610
At BHLH079 At5g62610 81 AF488611
At BHLH080 At1g35460 71 AF488612
At BHLH081 At4g09180 72 AF488613
At BHLH082 At5g58010 96 AF488614
At BHLH083 At1g66470 112 AF488615
At BHLH084 At2g14760 AJ577584
At BHLH085 At4g33880 115 AF488616
At BHLH086 At5g37800 113 NM_123139
At BHLH087 At3g21330 121 AF488617
At BHLH088 At5g67060 118 AF488618
At BHLH089 At1g06170 24 AF488619
At BHLH090 At1g10610 50 AF488620
At BHLH091 At2g31210 25 AJ519809
At BHLH092 At5g43650 22 AY065390
At BHLH093 At5g65640 47 AF488621
At BHLH094 At1g22490 16 AF488622
At BHLH095 At1g49770 21 AF488623
At BHLH096 At1g72210 15 AJ459771
At BHLH097 At3g24140 14 AF488624
At BHLH098 At5g53210 19 NM_124700
At BHLH099 At5g65320 18 AF488625
At BHLH100 At2g41240 7 AF488626
At BHLH101 At5g04150 10 AJ519810
At BHLH102 At1g69010 125 AF488627
At BHLH103 At4g21340 62 AY065362
At BHLH104 At4g14410 136 AF488628
At BHLH105 At5g54680 133 AF488629
At BHLH106 At2g41130 56 AY074639
At BHLH107 At3g56770 55 NM_115536
At BHLH108 At1g25310 132 NM_102341
At BHLH109 At1g68240 AJ577585
At BHLH110 At1g27660 59 NM_102531
At BHLH111 At1g31050 66 AA395190
At BHLH112 At1g61660 64 AF488630
At BHLH113 At3g19500 61 AF488631
At BHLH114 At4g05170 65 NM_116756
At BHLH115 At1g51070 134 AF488632
At BHLH116 At3g26744 45 ICE1 AY079016 Chinnusamy et al., 2003
At BHLH117 At3g22100 140 NM_113106
At BHLH118 At4g25400 5 NM_118672
At BHLH119 At4g28811 104 AJ519811
At BHLH120 At5g51790 4 NM_124558
At BHLH121 At3g19860 138 AF488633
At BHLH122 At1g51140 70 AY063120
At BHLH123 At3g20640 63 AU238908
At BHLH124 At2g46970 110 PIL1 AB090873 Yamashino et al., 2003
At BHLH125 At1g62975 2 AF506369
At BHLH126 At4g25410 3 Z46563
At BHLH127 At4g28815 AJ577586
At BHLH128 At1g05805 74 AY045907
At BHLH129 At2g43140 73 AU237473
At BHLH130 At2g42280 69 NM_129790
At BHLH131 At4g38071 AJ577587
At BHLH132 At3g62090 111 PIL2 AB090874 Yamashino et al., 2003
At BHLH133 At2g20095 AJ577588
At BHLH134 At5g15160 52 AK118887
At BHLH135 At1g74500 67 AY088286
At BHLH136 At5g39860 AY088246
At BHLH137 At5g50915 89 AY087602
At BHLH138 At2g31215 NM_179830
At BHLH139 At5g43175 116 NM_148080
At BHLH140 At5g01310 122 NM_120209
At BHLH141 At5g38860 127 NM_123247
At BHLH142 At5g64340 128 AY062561
At BHLH143 At5g09460 129 BT000009
At BHLH144 At1g29950 130 AF361607
At BHLH145 At5g50010 131 BT005301
At BHLH146 At4g30180 141 AU237244
At BHLH147 At3g17100 142 NM_180270
At BHLH148 At3g06590 143 NM_111535
At BHLH149 At1g09250 144 BT003052
At BHLH150 At3g05800 145 NM_111454
At BHLH151 At2g47270 146 NM_130295
At BHLH152 At1g22380 147 NM_102088
At BHLH153 At1g05710 AJ576040
At BHLH154 At2g31730 AJ576041
At BHLH155 At2g31280 AJ576042
At BHLH156 At2g27230 AJ576043
At BHLH157 At1g64625 AJ576044
At BHLH158 At2g43060 AJ576045
At BHLH159 At4g30410 AJ576046
At BHLH160 At1g71200 NM_105789
At BHLH161 At3g47710 NM_114639
At BHLH162 At4g20970 NM_118215
a

The prefix At indicates Arabidopsis thaliana (see text).

b

BHLH “entry numbers” (Toledo-Ortiz et al., 2003).

c

GenBank accession number of the cDNA sequence representing the open reading frame used to evaluate the presence or absence of a proper bHLH domain signature.

d

References for the synonyms that are used in the literature.

e

The synonym was found only in a GenBank entry but not in an article.