Table 5. 9-residue IDR complex test set selected from ELM.
Disordered protein name | Receptor protein name | Bound | Unbound | DisProt ID | ELM ID | ||
---|---|---|---|---|---|---|---|
Receptor PDB ID | Ligand chain | First res | Receptor PDB ID | ||||
Cyclin-dependent kinase inhibitor 1B | CDK2/Cyclin A | 1jsuAB | C | 25 | 2c5nAB | DP00018 | - |
34 | DP00018 | - | |||||
43 | DP00018 | - | |||||
52 | DP00018 | ELMI000069 | |||||
PIFtide | Protein kinase Akt-2 | 1o6lA | A | 469 | 1gzkA | DP00304 | ELMI001633 |
Glycogen synthase kinase-3 β | Protein kinase Akt-2 | 1o6lA | C | 4 | 1gzkA | DP00385 | - |
Protein phosphatase 1 regulatory subunit 12A | PP-1B | 1s70A | B | 1 | 4ut2A | DP00218 | - |
10 | DP00218 | ELMI002747 | |||||
22 | DP00218 | - | |||||
31 | DP00218 | ELMI001397 | |||||
Peroxisomal targeting signal 1 receptor | PEX14 | 2w84A | B | 101 | 5aonAa | DP00472 | ELMI002213 |
a: template-based model using MODELLER [43] (5aonA was used as the template, which has 46.9% sequence identity to 2w84A).