Table 3.

Alignment efficiencies and conversion rates for ERRBS of all samples.

Sample	Total Reads	Trimmed Reads	Unique Alignment	Alignment Efficiency	Conversion Rate
Control 1	101,048,410	100,855,039	62,220,409	61.70%	99.40%
Control 2	127,821,721	127,215,674	78,361,090	61.60%	99.00%
Control 3	102,862,686	102,170,841	58,944,438	57.70%	99.10%
Maternal Ethanol 1	109,878,778	108,966,846	52,870,280	48.50%	98.90%
Maternal Ethanol 2	124,275,848	123,559,339	74,581,912	60.40%	99.20%
Maternal Ethanol 3	107,454,830	106,658,607	64,249,678	60.20%	99.30%
Paternal Ethanol 1	114,893,371	113,982,695	69,455,351	60.90%	99.30%
Paternal Ethanol 2	106,580,485	105,705,397	69,203,843	65.50%	99.20%
Paternal Ethanol 3	99,166,858	98,773,966	61,786,238	62.60%	99.20%
Maternal + Paternal 1	139,906,554	138,640,440	81,779,772	59.00%	99.10%
Maternal + Paternal 2	121,250,474	120,463,927	69,505,491	57.70%	99.10%
Maternal + Paternal 3	106,204,238	105,806,869	66,903,713	63.20%	99.40%