Table 2.
Screening of chemical library for therapeutically effective anti-staphylococcal agent.
| Category | Parameter | Description |
|---|---|---|
| Assay | Type of assay | Inhibition of methicillin-resistant Staphylococcus aureus (MRSA) growth |
| Assay strategy | Identification of growth inhibitors of Staphylococcus aureus in vitro | |
| Assay protocol | Broth microdilution assay according to CLSI (Clinical and Laboratory Standards Institute, 2012) | |
| Primary measurement | Minimum Inhibitory Concentration (MIC) against MRSA4 | |
| Library | Library size | 103,873 screened |
| Library composition | Synthetic chemical compounds | |
| Source | Drug Discovery Initiative, The University of Tokyo | |
| Screen | Format | 96-well-plates, round bottom |
| Concentration(s) tested | 100 μM | |
| Plate controls | Vancomycin (100 μg/mL) and DMSO | |
| Reagent/ compound dispensing system | Manual | |
| Detection instrument and software | Manual | |
| Hit criteria | Compounds inhibiting growth of S. aureus MRSA4 at a concentration of 100 μM | |
| Hit rate | 3,383 (3.25%) | |
| Secondary screen | Additional assay(s) | Screening for therapeutic activity using silkworm infection model infected with S. aureus |
| Assay strategy | Identification of compounds that cure silkworms from S. aureus infection | |
| Assay protocol | According to Hamamoto et al. (2015). Fifty microliters of the compounds were injected to each silkworm. | |
| Concentration(s) tested | 2 mM | |
| Hit criteria | Compounds allowing survival of 2 of 3 silkworms infected with S. aureus MSSA1 | |
| Hit rate | 3 (0.003%) | |
| Confirmation of hit purity and structure | HPLC, NMR, chemical synthesis, and confirmation of activity of chemically synthesized compound |