Table 2.
Screening of chemical library for therapeutically effective anti-staphylococcal agent.
Category | Parameter | Description |
---|---|---|
Assay | Type of assay | Inhibition of methicillin-resistant Staphylococcus aureus (MRSA) growth |
Assay strategy | Identification of growth inhibitors of Staphylococcus aureus in vitro | |
Assay protocol | Broth microdilution assay according to CLSI (Clinical and Laboratory Standards Institute, 2012) | |
Primary measurement | Minimum Inhibitory Concentration (MIC) against MRSA4 | |
Library | Library size | 103,873 screened |
Library composition | Synthetic chemical compounds | |
Source | Drug Discovery Initiative, The University of Tokyo | |
Screen | Format | 96-well-plates, round bottom |
Concentration(s) tested | 100 μM | |
Plate controls | Vancomycin (100 μg/mL) and DMSO | |
Reagent/ compound dispensing system | Manual | |
Detection instrument and software | Manual | |
Hit criteria | Compounds inhibiting growth of S. aureus MRSA4 at a concentration of 100 μM | |
Hit rate | 3,383 (3.25%) | |
Secondary screen | Additional assay(s) | Screening for therapeutic activity using silkworm infection model infected with S. aureus |
Assay strategy | Identification of compounds that cure silkworms from S. aureus infection | |
Assay protocol | According to Hamamoto et al. (2015). Fifty microliters of the compounds were injected to each silkworm. | |
Concentration(s) tested | 2 mM | |
Hit criteria | Compounds allowing survival of 2 of 3 silkworms infected with S. aureus MSSA1 | |
Hit rate | 3 (0.003%) | |
Confirmation of hit purity and structure | HPLC, NMR, chemical synthesis, and confirmation of activity of chemically synthesized compound |