Table 3.
User roles
| Role | Description |
|---|---|
| ROLE_ADMIN | • Full system access • Create and remove users • Assign user roles |
| ROLE_DEV | • Same rights as ROLE_ADMIN except, • Patient names and DOBs are suppressed on screen and in reporting • Additional diagnostics are available within all environments (including Production) |
| ROLE_CURATOR | • The curators can create variant evidence • Assign the pathogenicity for curated variants. • If all checks pass they can lock a sample into the final review state • Produce final reports |
| ROLE_LAB | • The user can update the Seqrun QC • Update Sample QC • Submit variants for curation • Submit a sample for first review • Produce draft reports |
| ROLE_EXPERT | The user has the same access as a curator but can subscribe to certain curation categories of interest such as genes, variants or patients |
| ROLE_VIEWER | The user only has access to the splash page and the reference tables |
PathOS supports multiple roles for access control and workflow