Name | Features | Promoter/Vector | Details |
---|---|---|---|
ERM-APEX2 | C1(1-27)-APEX2-V5-Stop | CMV/pLX304 | Soybean APEX2 has four mutations relative to wild-type ascorbate peroxidase: K14D, W41F, E112K, and A134P (Lam et al., 2015). C1(1-27) indicates the first 27 amino acids from rabbit cytochrome P450 2C1 (Ahn et al., 1993): MDPVVVLGLCLSCLLLLSLW KQSYGGG V5: GKPIPNPLLGLDST This lentiviral vector carries a blasticidin resistance marker. |
APEX2-OMM | Flag-APEX2-MAVS(510-540)-Stop | CMV/pLX304 | Flag: DYKDDDDK MAVS(510-540) (Seth et al., 2005): RPSPGALWLQVAVTGVLVVT LLVVLYRRRLH This lentiviral vector carries a blasticidin resistance marker. |
APEX2-NES | Flag-APEX2-NES-Stop | CMV/pLX304 | NES: LQLPPLERLTLD This lentiviral vector carries a blasticidin resistance marker. |
SYNJ2BP-V5 | SYNJ2BP-linker-V5-Stop | CMV/pLX_TRC208 | The SYNJ2BP gene was originally obtained as SYNJ2BP-linker-V5 in pLX304 from the Broad Institute. We made a CRISPR-resistant version and moved the construct to this pLX_TRC208. Linker: CPTFLYKVV This lentiviral vector carries a hygromycin resistance marker. |
mito-tagBFP | mito-tagBFP-Stop | CMV/pcDNA3 | The tagBFP (blue fluorescent protein) gene was cloned from pHR-SFFV-dCas9-BFP, a gift from Stanley Qi and Jonathan Weissman (Addgene plasmid # 46910) (Gilbert et al., 2013). Mitochondrial matrix targeting sequence (‘mito’): MLATRVFSLVGKRAISTSVCVR |
V5-GFP-RRBP1 | Calreticulin signal peptide-V5-GFP-RRBP1-Stop |
CMV/pcDNA4 HisMax | GFP (green fluorescent protein)-RRBP1 in pcDNA4 HisMax was a gift from Alexander F. Palazzo (University of Toronto) (Cui et al., 2012). The RRBP1 gene is the full-length version with 54 decapeptide repeats and the three amino acids after the decapeptide repeat region. |
V5-APEX2-NLS | V5-APEX2-NLS-Stop | CMV/pcDNA3 | NLS: SRADPKKKRKVDPKKKRKVD PKKKRKV |
Flag-APEX2-NLS | Flag-APEX2-NLS-Stop | CMV/pcDNA3 | |
Flag-APEX2-CAAX | Flag-APEX2-CAAX-Stop | CMV/pcDNA3 | CAAX: RSKLNPPDESGPGCMSCKCV LS |