Table 1. Summary of the fundamental kinetic constants introduced in Eq. 1 and Fig. 2.
Step | Dimension | Parameter† | Units | Description | Refs |
---|---|---|---|---|---|
Diffusion | 3D | M−1 s−1 | On-rate constant | 16 | |
Diffusion | 3D | s−1 | Off-rate constant | 16 | |
Diffusion | 3D | M−1 | Affinity | 16 | |
Rotation | 3D | s−1 | On-rate constant | 15,21 | |
Rotation | 3D | s−1 | Off-rate constant | 15,21 | |
Rotation | 3D | — | Affinity | 15,21 | |
Diffusion | 2D | s−1 | On-rate constant | 16 | |
Diffusion | 2D | s−1 | Off-rate constant | 16 | |
Diffusion | 2D | Affinity | 16 | ||
Rotation | 2D | s−1 | On-rate constant | 15,21 | |
Rotation | 2D | s−1 | Off-rate constant | 15,21 | |
Rotation | 2D | — | Affinity | 15,21 | |
Binding | — | k+ | s−1 | On-rate constant | 15,21 |
Binding | — | k− | s−1 | Off-rate constant | 15,21 |
Binding | — | KA = k+/k− | — | Affinity | 15,21 |
Note that the fundamental binding constants (k+, k−) and the corresponding binding affinity constant (KA) are independent of the dimensionality of the experiment.
†NA, Avogradro constant. Ac, effective cell surface area, defined as Ac = πa2, where a ≡ TCR encounter radius.