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. 2017 Apr 26;7:46741. doi: 10.1038/srep46741

Table 2. Summary of the effective kinetic constants for the effective models described in Fig. 3 and their relationship to the fundamental kinetic constants of Table 1.

Model effective constant Eq. no. Units Dimension Assay and references
PBA Inline graphic (6) s−1 2D TF ref. 10
koff = k (7) s−1 2D TF ref. 10
Inline graphic (8) 2D TF ref. 10
PBB Inline graphic (9) s−1 2D TF§ ref. 10
Inline graphic (10) s−1 2D TF§ ref. 10 and MD-SMFM ref. 25
Inline graphic (11) 2D TF§ ref. 10
Inline graphic (12) s−1 3D Bulk FRET ref. 6
Inline graphic (13) s−1 3D Bulk FRET ref. 6 and MD-SMFM ref. 24
Inline graphic (14) 3D Bulk FRET ref. 6
FRET Inline graphic (15) Inline graphics−1 2D SM-FRET ref. 11
Inline graphic (16) s−1 2D SM-FRET ref. 11
Inline graphic (17) Inline graphic 2D SM-FRET ref. 11
SS Inline graphic (18) Inline graphics−1 2D AF ref. 10
Inline graphic (19) s−1 2D AF ref. 10
Inline graphic (20) Inline graphic 2D AF ref. 10
Inline graphic (21) M−1s−1 3D SPR refs 2,6,7
Inline graphic (22) s−1 3D SPR refs 2,6,7
Inline graphic (23) M−1 3D SPR refs 2,6,7

PBA: Pre-binding model A; PBB: Pre-binding model B; FRET: FRET model; and SS: Single-step model.

TF, thermal fluctuation. MD-SMFM, molecular diffusion and single molecule fluorescent microscopy. FRET, fluorescence resonance energy transfer. SM, single molecule. AF, adhesion frequency. SPR, surface plasmon resonance.

Assuming unbinding implies a change of orientation.

§Assuming multiple binding/unbinding events take place before a change of orientation.