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. 2017 Apr 26;12(4):e0176347. doi: 10.1371/journal.pone.0176347

Table 1. Strains of Corynebacterium pseudotuberculosis isolated from buffalo diagnosed with Oedematous Skin Disease in Egypt during the summer of 2008.

Strain Genome size (bp) Mean coverage depth De novo assembler CDS tRNA rRNA Accession number
31 [19] 2,402,956 550x MIRA 4.0.2; SPADES 3.1.1 2248 47 12 CP003421.3
32 2,403,533 56.61x Newbler 2.9 2272 52 12 CP015183
33 2,403,550 104.11x Newbler 2.9 2281 52 12 CP015184
34 2,403,454 58.94x MIRA 3.9.18 2286 49 12 CP015192
35 2,403,502 112.68x Newbler 2.9 2276 52 12 CP015185
36 2,403,412 172.02x SPAdes 3.6.0 2279 49 12 CP015186
38 2,403,515 160.27x SPAdes 3.6.0 2281 49 12 CP015187
39 2,403,579 241.79x SPAdes 3.6.0 2281 49 12 CP015188
43 2,365,075 218.07x Newbler 2.9 2218 51 12 CP015189
46 2,366,565 249.57x SPAdes 3.6.0 2218 48 12 CP015190
48 2,403,301 306.54x SPAdes 3.6.0 2281 49 12 CP015191