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. 2017 Apr 28;7:45040. doi: 10.1038/srep45040

Table 1. The 10 novel genome-wide significant loci (p < 5 × 10−8) associated with eGFRcrea in up to 110,517 subjects from up to 33 studies.

Variant ID Chr Position Index Gene Effect allele/non-effect allele Effect allele frequency Effect (SE) p-value I2 (%) IQ Number of subjects in analysis
rs10874312 1 82,944,571 LPHN2 A/G 0.67 −0.0057 (0.0011) 2.20 × 10−08 19 1.00 107,335
rs12144044 1 113,248,791 RHOC A/C 0.28 −0.0061 (0.0011) 2.87 × 10−08 0 0.96 110,517
rs187355703 2 176,993,583 HOXD8 C/G 0.97 0.0182 (0.0030) 5.15 × 10−10 5 0.89 109,257
rs111366116 5 53,295,546 ARL15 T/C 0.11 0.0094 (0.0015) 6.27 × 10−10 22 0.97 110,517
rs113246091 5 67,739,274 PIK3R1 A/G 0.10 −0.0095 (0.0016) 1.98 × 10−09 43 0.98 110,105
rs7764488 6 133,812,872 EYA4 A/G 0.32 0.0061 (0.0011) 4.08 × 10−09 1 0.98 110,516
rs13298297 9 119,264,108 ASTN2 A/G 0.20 −0.0075 (0.0014) 1.53 × 10−08 0 0.81 110,514
rs1111571 16 68,363,181 SLC7A6 A/G 0.71 0.0061 (0.0011) 6.20 × 10−09 0 1.00 109,275
rs9962915 18 5,593,171 EPB41L3 T/C 0.48 −0.0055 (0.0010) 7.19 × 10−09 0 0.98 110,516
rs12458009 18 59,350,507 RNF152 T/G 0.78 −0.0064 (0.0012) 2.90 × 10−08 21 1.00 107,325

Positions are given on GRCh build 37. The gene closest to the variant is listed (index gene). Effect sizes are given on the log scale. IQ = Imputation quality metric computed as median of info score (ImputeV2) or RSQ (minimac) across studies. SE = standard error. I2 = between-study heterogeneity statistic.