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. 2016 Sep 30;33(3):334–340. doi: 10.1093/bioinformatics/btw629

Table 1.

Testing results for five sigma classes of E. coli and cyanobacteria1

σ class TP FN TN FP Sn, % Sp, % P1, % P2, % F1, %
σ70 180 20 377 23 90.0 93.3 94.0 90.4 92
σ38 37 3 75 5 92.5 93.8 93.7 92.6 93.1
σ32 46 4 95 5 92.0 95.0 94.9 92.2 93.4
σ28 31 4 69 1 88.6 98.6 98.4 89.6 93.2
σ24 86 14 193 7 86.0 96.5 96.1 87.3 90.7
σA 921 79 1921 79 92.1 96.1 95.9 92.4 94
σC 36 14 96 4 72 96 94.7 75.0 81.8
σF 80 20 193 7 80.0 96.5 95.8 82.8 87.2
σG 72 28 188 12 72.0 94.0 92.3 77.1 80.9
σH 38 12 92 8 76 92 90.5 74.2 82.6
1

Test experiments for every sigma class were repeated 10 times for randomly selected negative sets and the means were taken.