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. 2017 May 1;12(5):e0175924. doi: 10.1371/journal.pone.0175924

Table 4. Target prediction of known tae-miRNAs in wheat seeds.

miRNA Target accession Known annotation New annotation
tae-miR167c-5p TC402576 CV773862 TC422705 Auxin Response Factor No results.
tae-miR156 Squamosa Promoter-binding-Like protein (SPL) Teosinte glume architecture 1,
TC453361 CK196549 AL810223 TC409846 Glycosyl/glycerophosphate transferase,
DR739383 TC384445 TC420438 TC412204 Predicted permease,
TC441570 TC373290 TC398965 TC460639 Cob(I)alamin adenolsyltransferas,
TC372857 TC390294 CA741955 TC370322 Cytochrome P450,
TC413555 CA612886 Telomere binding protein,
Initiator binding protein.
tae-miR9664-3p Not available NB-ARC domain containing protein,
CN008390 CN007906 CJ899791 DR734475 Nodulin-like protein,
CK202829 CK203152 BE425456 BE604149 NB-ARC domain containing protein,
CD876018 CA499346 CV779224 TC436817 NBS-LRR resistance-like protein,
CK193467 TC451016 BJ245571 BE585521 Resistance protein RGA1R,
CV772438 TC401974 DR738720 TC379417 LRR19,
Alternative splicing regulator.
tae-miR319 TCP and MYB transcription factor Glycosyl transferase,
TC407332 CK212140 TC421314 TC368630 Histone H2B,
BF485310 CA484819 TC455115 BE517710 Acyl-CoA synthetase,
GH728978 TC438746 CA630893 TC398226 Trans-cinnamate 4-monooxygenase,
TC432120 CK215833 CJ863381 Type 1 non specific lipid transfer protein precursor,
Transcription factor PCF8,
Ribosomal protein L3-A2-II.
tae-miR9659-3p TC438538 CA606192 CV779210 TC382784 Not available Anaeromyxobacter dehalogenans,
TC454472 TC371921 TC438010 BQ904504 Glutathione transferase,
BE401763 CA639001 TC393061 TC371776 HvPIP1;5 protein,
TC370293 CD875198 TC383120 Aquaporin PIP1-2,
Inositol-1,4,5-triphosphate-5-phosphatase.
tae-miR164 TC416811 CA642340 TC390810 TC376198 NAC domain-containing protein
TC394945 TC373635 TC371535 TC410195
TC429623 CA704421 TC393137 TC421735 Efflux ABC transporter permease protein,
TC369110 CA681504 TC398164 TC406273 Harpin-induced protein 1 containing protein,
TC394481 TC371551 TC370694 TC382290 Mitogen-activated protein kinase homolog 1,
TC375350 DR741669 TC368951 DR741517 ZmRR2 protein,
TC378810 BE515854 TC435250 TC430604 Phytosulfokine-alpha 1 precursor,
CK211831 TC445043 TC458082 CA648036 OTU-like cysteine protease family protein,
TC408311 TC407532 TC430881 TC407133 Sugar transport protein.
TC404361 TC411029 TC384650 CK198447
CK216067 BJ266172
tae-miR9678-3p TC427317 DR736808 TC381152 CJ648199 Not available F-box protein-like.