Table 1. Kinetic rates that are used in simulations.
Kinetic processes | Symbols of rates | Values of rates |
---|---|---|
Activator/repressor binding | kon | 0.0027s−1 (per TF per promoter) [42] |
Activator/repressor unbinding | koff | 0.0023s−1 (per TF-promoter complex) [86] |
mRNA production (transcription) | r | 0.33s−1 (per ‘activator-bound’ or ‘repressor-free’ promoter) [87] |
mRNA decay | γ | 0.011s−1 (per mRNA) [41] |