Figure 7.

Summary of root and shoot combinatorial pCRE rules and model performance. A, Precision-recall curves and AUC-ROCs of root salt up-regulation models based on combinatorial rules (green) and the full pCRE set (black). B, Precision-recall curves and AUC-ROCs of shoot salt up-regulation models based on combinatorial rules (green) and the full pCRE (black). C, Heat maps summarizing the types of pCREs (blue, root specific; red, shoot specific; and orange, general) involved in root or shoot salt up-regulation rules. D, Sequence logos of pCRE involved in top root and shoot rules. E, Inference of TF interactions based on root combinatorial rules. Node, A TF family with one or more TFs with significant similarity to a pCRE involved in root rules; edge, inferred based on pCRE combinations with thickness/color indicating the number of times that a pair of TFs from various families interact based on the pCRE combinatorial rules. F, Same as in E but for shoot pCRE combinatorial rules.