Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2017 May;27(5):778–786. doi: 10.1101/gr.213652.116

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2017 Jiao et al.; Published by Cold Spring Harbor Laboratory Press

This article, published in Genome Research, is available under a Creative Commons License (Attribution 4.0 International), as described at http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Figure 1. — Assembly results and strategies. (A–C) Assembly contiguity of the assemblies of three species: A. alpina (A), E. syriacum (B), C. planisiliqua (C). The x-axis indicates the cumulative length of contigs sorted by length (expressed as percent of the entire assembly). The y-axis shows individual contig or scaffold length. The dashed line indicates the N50/L50 values. (D) Misassemblies identified with Illumina mate-pairs (yellow) and their overlap with breaks introduced during misassembly identification using optical maps (in two steps shown in green and blue). (E) Misassemblies identified with Illumina mate-pair alignments (yellow) and their overlap with breaks introduced during our integration of Dovetail Genomics chromosome conformation capture data (again, two steps shown in green and blue). (F) Inter-chromosome misassemblies identified by a genetic map in each of the assemblies (as shown in A).