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. 2017 May 2;6:89. doi: 10.1186/s40249-017-0296-0

Table 1.

HGDI values of MLVA-11 loci for Brucella strains

Locus Diversity Index (n = 600) Confidence Interval K Max (pi)
Bruce19 0.867 0.843 – 0.892 16 0.200
Bruce12 0.758 0.713 – 0.802 10 0.333
Bruce18 0.703 0.646 – 0.760 7 0.457
Bruce06 0.62 0.548 – 0.692 6 0.552
Bruce11 0.567 0.465 – 0.669 8 0.638
Bruce08 0.533 0.441 – 0.624 5 0.648
Bruce21 0.513 0.424 – 0.603 6 0.657
Bruce43 0.512 0.424 – 0.600 4 0.657
Bruce42 0.503 0.406 – 0.601 6 0.676
Bruce55 0.395 0.290 – 0.501 4 0.762
Bruce45 0.364 0.271 – 0.458 4 0.771

Hunter Gaston Diversity Index (HGDI) was used to measure the variation of multiple locus variable-number tandem repeat locus, which ranges from 0.0 (no diversity) to 1.0 (complete diversity); Confidence Interval is Precision of the Diversity Index and expressed as 95% upper and lower boundaries; K: Number of different repeats present at this locus in this sample set; Max (pi): Fraction of samples that have the most frequent repeat number in this locus (ranging from 0.0 to 1.0); n: The number of the isolates according to the considered locus