Table 1.
GCH | Position on the Y chromosomea | Length | Donor-to-acceptor | Active or historical GCH | GCH in chimp | Number of donors | Unfiltered SNPsb | Recurring SNPsb | Filtered SNPsb | Reference |
---|---|---|---|---|---|---|---|---|---|---|
HSA | 7096711–7097641 | 931 | X-to-Y | Active | Yes | Single donor | 4 | 0 | 0 | Rosser et al., 2009 |
CER3 | 7163099–7163862 | 776 | X-to-Y | Historical | Yes | Single donor | 2 | 0 | 2 | Trombetta et al., 2014 |
CER6 | 7169931–7170442 | 493 | X-to-Y | Active | No | Single donor | 1 | 0 | 0 | Trombetta et al., 2014 |
CER7 | 7171778–7173059 | 1283 | X-to-Y | Active | Yes | Single donor | 5 | 0 | 2 | Trombetta et al., 2014 |
CER9 | 7234931–7235419 | 489 | X-to-Y | Historical | Yes | Single donor | 3 | 0 | 0 | Trombetta et al., 2014 |
CER12 | 7319098–7319526 | 429 | X-to-Y | Historical | Yes | Single donor | 3 | 0 | 3 | Trombetta et al., 2014 |
CER15 | 14051551–14051623 | 73 | X-to-Y | Active | Yes | Single donor | 0 | 0 | 0 | Trombetta et al., 2014 |
CER17 | 14483248–14484067 | 884 | X-to-Y | Active | Yes | Single donor | 4 | 0 | 3 | Trombetta et al., 2014 |
CER18 | 14484255–14484908 | 655 | X-to-Y | Active | No | Single donor | 6 | 0 | 3 | Trombetta et al., 2014 |
CER19 | 14490130–14490661 | 535 | X-to-Y | Historical | Yes | Single donor | 2 | 1 | 0 | Trombetta et al., 2014 |
LTR2 | 2865434–2866983 | 1549 | X-to-Y/autosome-to-Y | Active | – | Multiple donors | 39 | 6 | 13 | Trombetta et al., 2016 |
ARSDP | 14491586–14491933 | 348 | X-to-Y | Active | – | Single donor | 5 | 1 | 1 | Trombetta et al., 2010 |
VCY | 16097652–16098392 | 740 | X-to-Y | Active | Yes | Multiple donors | 0 | 0 | 0 | Trombetta et al., 2010 |
16168098 –16168838 |
aGenomic position according to GChR37/hg19.
bData from Karmin et al. (2015).