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. 2017 May 2;13:118. doi: 10.1186/s12917-017-1035-2

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — Percentage relative abundance of bacteria in post-mortem lung (L) and corresponding lymph node (LN) samples from clinically healthy H-F calves with lung lesions (n = 12) and without lung lesions (n = 8). Adjacent profiles of L and LN are from the same animal. The first seven calves received antibiotic treatment during their lifetimes. Grey bars represent infrequently occurring OTUs (see Additional file 6 for full details of all bacterial OTU classifications)