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. 2017 Apr 11;6:e16059. doi: 10.7554/eLife.16059

Figure 9. The CID/NCBD complex displays minor structural changes upon evolution.

(A) Free-energy surfaces (in kJ/mol) as a function of the fraction of helix content and the Rg, for the most ancient complex (D/P NCBD and 1R CID), the 1R/2R complex and one extant complex (human NCOA3 CID/CREBBP NCBD). For each free-energy surface, the position of the minimum and a set of representative structures are shown: CID in yellow and NCBD in blue. N- and C- termini (NT and CT, respectively) are labeled for the central ensemble. (B) Per residue helix population of the protein ensembles of the most ancient (blue circles), 1R/2R (green squares) and extant (red bars) variants as predicted by δ2D from the chemical shifts. (C) Average root-mean-square fluctuation for the three variants showing a weak correlation between historical age and conformational heterogeneity of the complex.

DOI: http://dx.doi.org/10.7554/eLife.16059.020

Figure 9—source data 1. Chemical shift data of CID/NCBD complexes used in the molecular dynamics simulations.
DOI: 10.7554/eLife.16059.021

Figure 9.

Figure 9—figure supplement 1. Heteronuclear single quantum correlation (1H/15N) spectra for the ancient complex between 1R CID and D/P NCBD (red peaks) and the extant complex between human NCOA3 CID and CREBBP NCBD (blue peaks).

Figure 9—figure supplement 1.

The spectra were recorded such that either the CID domain was NMR active (panel A) or the NCBD was NMR active (panel B).