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. 2017 Mar 16;27(6):555–567. doi: 10.1093/glycob/cwx019

Table II.

Oligonucleotide primers used for PCR amplification reactions

Primers Sequence (5′–3′)
1a GGTACCCCCGATAGCTTCCGCTATTGC
2 CTACGAAGGATGAAATTTTTCAGGG
3a GCAATAGCGGAAGCTATCGGGGGTACC
4 CCCTGAAAAATTTCATCCTTCGTAG
48 GTCAGATAGGCCTAATGACTGGC
76 TTATAAAAGCCAGTCATTAGGCCTATCTGAC
77b aatcaGCATGC GGTACCTTATAAAAGCCAGTCATTAGGCCTATCTGAC
118 ATGGCTACAATGGTCTGTAATTATCTTC
119 TTATATTACTGTTATTGTTCGTAGATCC
120 CCATGATAATCTCGACTTCGG
121 GCAATAGCGGAAGCTATCGGGGGTACCATTCCTATCTCTTGAAGGATAGG
122 CCCTGAAAAATTTCATCCTTCGTAGGTATAGAGGTACAATGGATATAGGGC
123 GCACCCATTTATCTAAATAATCTTC
124 GGCCCTCAACCTTTTCTGGC
125 CCTATCCTTTAGGTATCTATATG
126b CGAACAATAACAGTAATATAATGTACAATGAACTTTAATAAAATTGATTTAGAC
127 aatcaCATATGGGTACCTTATAAAAGCCAGTCATTAGGCCTATCTGAC
128 aatcaGGTACCGTATAGAGGTACAATGGATATAGGGC
130 CCAATTGTCTAAATCAATTTTATTAAAGTTCATTGTACATTATATTACTGTTATTGTTCGTAGATCC
133 aatcaTGTACATTATATTACTGTTATTGTTCGTAGATCCTC
134 aatcaCTCGAGCCATGATAATCTCGACTTCGG
140 aatcaCATATGGCACCCATTTATCTAAATAATCTTC
152 CTAAATTTCTTTCATAATAATTCTTTGTATAATGATTGATGTTTTAAATTTAGAATGGACC
153 GGTCCATTCTAAATTTAAAACATCAATCATTATACAAAGAATTATTATGAAAGAAATTTAG
460c ATGACAAAAAAGAAATTGCCCGTTCGTTTTAC
461c CTACGAAGGATGAAATTTTTCAGGGACAAC
474d CGGGCAATTTCTTTTTTGTCATTTCTTAATGTAATCTAAGTCCAACCG
475d TTGTAGCAGAACTATCAGCCAATCAC
476d GTTGTCCCTGAAAAATTTCATCCTTCGTAGGTATAGAGGTACAATGGATATAG
477d CCCAGACTCTTCTTTAACAAGAAACC
512 TGCAGGCTGCAATTGATTCC
513 GATCCCACGTGAAAGCAAATA
524 GTAAAACGAACGGGCAATTTCTTTTTTGTCAT
525 CCCTGAAAAATTTCATCCTTCGTAG
530 CGTATGATATTTGCAGTCTTG
531 GTAATAACCATATCTGCCTCTGGAAC
540 CAACAATTGTAGCAGAACTATCAGCC
541 aatcaGGTACCTATAAGTATAGAGGTACAATGGATATAGG
542 aatcaGCATGCGGTATCTATATGAAGTACGCACC
543 ctgaCTCGAGCAACAATTGTAGCAGAACTATC
565 CTAAATCAATTTTATTAAAGTTCAT
575 TCTAAATTAAGAATATCCATTTCTTAATGTAATCTAAGTCCAACCGCATTCC
576 GACTTAGATTACATTAAGAAATGGATATTCTTAATTTAGAATGGACTTCC

Nucleotides used for overlap-extension PCRs are written in bold, artificial restriction sites are underscored. Lowercase letters indicate artificially introduced bases to improve restriction enzyme digestion.

dSequence (3′–5′).