Table 4.
Most altered transcripts in larvae.
| Transcript ID | No. of reads Adult | No. of reads Larvae | DEseq fold change l/a | FPKM of adult | FPKM of larvae | Description | Stat | P-values |
|---|---|---|---|---|---|---|---|---|
| AAEL004745 | 0 | 4,323 | 1.19E+04 | 0.00 | 427.80 | Pupal cuticle protein, putative | −11.74 | 0.00 |
| AAEL011504 | 0 | 3,416 | 9.65E+03 | 0.00 | 735.75 | Pupal cuticle protein, putative | −11.36 | 0.00 |
| AAEL008451 | 13 | 72,532 | 9.43E+03 | 0.33 | 3,388.57 | Alpha-amylase | −45.76 | 0.00 |
| AAEL013773 | 4.5 | 21,608 | 7.49E+03 | 0.23 | 1,960.42 | Hypothetical protein | −28.37 | 0.00 |
| AAEL005340 | 10.5 | 46,415 | 7.40E+03 | 0.42 | 3,261.52 | Hypothetical protein | −40.62 | 0.00 |
| AAEL017056 | 4 | 17,764 | 6.84E+03 | 0.35 | 2,690.37 | Peptidoglycan recognition protein sc2 | −26.73 | 0.00 |
| AAEL013777 | 28 | 103,708 | 6.43E+03 | 1.61 | 11,037.10 | Hypothetical protein | −60.12 | 0.00 |
| AAEL011930 | 5.5 | 21,337 | 6.20E+03 | 0.30 | 1,984.13 | Hypothetical protein | −30.15 | 0.00 |
| AAEL007044 | 1 | 5,528 | 6.14E+03 | 0.03 | 279.69 | Lipase | −16.15 | 0.00 |
| AAEL008045 | 6.5 | 24,312 | 6.07E+03 | 0.11 | 682.97 | Hexamerin 2 beta | −32.27 | 0.00 |
The most upregulated transcripts in larval vs. adult MTs. Generated by DEseq. Several proteins with chitin binding domains are highly increased in larvae.