Table 1. Case selection requirements for WGS.
1. Obtain a case summary from physicians with expertise in the patient's condition to help the laboratory correlate the patient's phenotype and family history with the genotype derived from sequencing. |
2. Confirm that the patient has had the current standard diagnostic testing used to evaluate that patient's phenotype to ensure that a cost-effective approach has been taken to diagnosis. |
3. Choose patients with an apparently undiagnosed monogenic genetic disorder ideally with a rare or distinctive phenotype. |
4. Focus on cases where a molecular diagnosis could help physicians/families with medical decision making/management such as treatment and family planning, a key to securing insurance preauthorization. |
5. Select cases with appropriate samples available to carry out initial genomic sequencing as well as follow-on testing including confirmatory functional assays in the patient and segregation analysis of variants in the parents and other family members. |
6. Choose cases where the cost of genomic sequencing appears to be less costly than testing many individual genes for the phenotype in question. |
Abbreviation: WGS, whole genome sequencing.
Note: The criteria that the review committee used to select cases for whole genome sequencing are summarized.