Table 1.
Summary of read numbers based on the RNA-Seq data obtained from each sample
Map to gene | Reads number | ||||
---|---|---|---|---|---|
0W | 2W + V | 2W-V | 3W + V | 3W-V | |
Total reads | 19,519,570 | 21,999,628 | 19,615,348 | 18,455,548 | 26,001,726 |
Total base pairs | 1,951,957,000 | 2,199,962,800 | 1,961,534,800 | 1,845,554,800 | 2,600,172,600 |
Total mapped reads | 15,403,899 | 17,602,328 | 15,895,801 | 14,880,551 | 20,840,238 |
Perfect match | 10,902,682 | 12,365,769 | 11,117,796 | 10,316,215 | 14,311,296 |
≤2 bp mismatch | 4,501,217 | 5,236,559 | 4,778,005 | 4,564,336 | 6,528,942 |
Unique match | 11,774,798 | 13,386,594 | 12,147,205 | 11,350,543 | 16,042,994 |
Multi-position match | 3,629,101 | 4,215,734 | 3,748,596 | 3,530,008 | 4,797,244 |
Total unmapped reads | 4,115,671 | 4,397,300 | 3,719,547 | 3,574,997 | 5,161,488 |