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. 2017 May 9;112(9):1885–1893. doi: 10.1016/j.bpj.2017.03.039

Figure 2.

Figure 2

Results of MAPK1 and vinculin molecular docking using HADDOCK. Potential MAPK1-open vinculin complexes were generated using data-driven molecular docking with HADDOCK. Representative structures were taken from each of the top four ranked HADDOCK clusters, and are shown here. Complexes 1–4 are shown in (A)–(D), respectively. Unphosphorylated MAPK1 is shown in surface representation, and open vinculin is shown in ribbon representation. The N-lobe (red) and C-lobe (yellow) of MAPK1, as well as the D1 (violet), D2 (lime), D3 (blue), D4 (orange), PRL (gray), and Vt (cyan) domains of vinculin are separately colored. To see this figure in color, go online.