TABLE 1.
Strain | Accession no. | Genome size (bp) | N50 (bp) | No. of contigs | pyrCa | gyrBa | recAa | dnaEa | tnaAa | pntAa | dtdSa | Pirb |
---|---|---|---|---|---|---|---|---|---|---|---|---|
MVP1 | MQMQ01000000 | 5,230,330 | 60,033 | 172 | 303 | 143c (591/592) | 218 | 308c (556/557) | 26 | 30 | 355c (457/458) | + |
MVP2 | MSBY01000000 | 5,275,177 | 129,821 | 89 | 303 | 143c (591/592) | 218 | 308c (556/557) | 26 | 30 | 355c (457/458) | + |
MVP4 | MSBZ01000000 | 5,270,749 | 94,277 | 122 | 27 | 141 | 31c (728/729) | 110c (556/557) | 26 | 18 | 232 | − |
MVP6 | MSCA01000000 | 5,195,990 | 47,800 | 190 | 303 | 143c (591/592) | 218 | 308c (556/557) | 26 | 30 | 355c (457/458) | + |
MVP9 | MSCB01000000 | 4,967,664 | 87,871 | 115 | 54c (492/493) | 144 | 116 | 28 | 61 | 26 | 252 | − |
Numerical values indicate the MLST allele for the respective genes.
+, presence of both pirA and pirB genes; −, absence of both pirA and pirB genes.
Closest allele hit, with values in parentheses indicating the number of positions over the length of the gene fragment where all of the bases at that position are identical.