Table 2.
Representation of classes of putative extracellular proteins in P. palmivora secretome (strain LILI)
Functional category | Number of proteins |
---|---|
Effectors and effector candidates | 224 |
RXLR effectors | 140 |
RXLR-EER with WY domain | 30 |
RXLR-EER | 93 |
RXLR with WY domain | 3 |
RXLR only | 14 |
Crinklers | 15 |
Extracellular protease inhibitors (EPIs) | 28 |
Necrosis-inducing proteins (NLPs) | 24 |
Repeat-containing proteins | 17 |
Elicitins/elicitors | 42 |
Lectins including cellulose binding elicitor lectin (CBEL) | 25 |
HxGPCExxxDD | 42 |
Small cysteine-rich proteins (SCRs) | 28 |
Cell wall-degrading enzymes (CWDEs) | 143 |
Glycosyl hydrolase | 80 |
Pectate lyase | 16 |
Pectin esterase | 8 |
Cellulase | 6 |
Glucosidase | 4 |
Polysaccharide lyase | 3 |
Other | 26 |
Cutinase | 3 |
Protease | 59 |
Serine protease | 27 |
Cysteine protease | 12 |
Metalloendopeptidase | 8 |
Aspartyl protease | 4 |
Other | 8 |
Oxidase | 45 |
Kinase | 41 |
Other enzymes | 158 |
Hypothetical | 1260 |