Table 1.
15-mer Peptide candidates tested individually for CD8+ T cell cytokine release.
| Pool # | Peptide # | Sequence | % IFNγ + CD8 + T cells | Anchor Compatible Class I H-2 allele |
|---|---|---|---|---|
| Pool 5 | 33 | QTWLESREYTKHLIR | 0.029 | |
| 34 | ESREYTKHLIRVENW | 0.000 | ||
| 35 | YTKHLIRVENWIFRN | 0.140 | ||
| 36 | LIRVENWIFRNPGFA | 0.007 | ||
| 37 | ENWIFRNPGFALAAA | 0.022 | ||
| 38 | FRNPG F ALAAAAIAW | 0.490 | Kb | |
| 39 | GFALAAAAIAWLLGS | 0.021 | ||
| 40 | AAAAIAWLLGSSTSQ | 0.100 | ||
| Pool 6 | 41 | IAWLLGSSTSQKVIY | 0.029 | |
| 42 | LGSSTSQKVIYLVMI | 0.000 | ||
| 43 | TSQKVIYLVMILLIA | 0.037 | ||
| 44 | VIYLVMILLIAPAYS | 0.053 | ||
| 45 | VMILLIAPAYSIRCI | 0.016 | ||
| 46 | LIAPA Y SIRCIGVSN | 0.320 | Kb | |
| 47 | AYSIRCIGVS N RDFV | 0.440 | Db | |
| 48 | RCIGVS N RD F VEGMS | 0.380 | Db/Kb | |
| Pool 7 | 49 | VSNRDFVEGMSGGTW | 0.170 | |
| 50 | DFVEGMSGGTWVDVV | 0.045 | ||
| 51 | GMSGGTWVDVVLEHG | 0.027 | ||
| 52 | GTWVDVVLEHGGCVT | 0.018 | ||
| 53 | DVVLEHGGCVTVMAQ | 0.017 | ||
| 54 | EHGGCVTVMAQDKPT | 0.027 | ||
| 55 | CVTV M AQDKPTVDIE | 0.350 | Db | |
| 56 | MAQDKPTVDIELVTT | 0.000 | ||
| Pool 11 | 81 | NLEYRIMLSVHGSQH | 0.046 | |
| 82 | RIMLSVHGSQHSGMI | 0.009 | ||
| 83 | SVHGSQHSGMIVNDT | 0.009 | ||
| 84 | SQHSGMIVNDTGHET | 0.000 | ||
| 85 | GMIVNDTGHETDENR | 0.027 | ||
| 86 | NDTGHETDENRAKVE | 0.009 | ||
| 87 | HETDE N RAKVEITPN | 0.340 | Db | |
| 88 | ENRAKVEITP N SPRA | 0.350 | Db |
Peptides that induced IFNγ expression in >0.2% of CD8+ T cells were considered hits. Possible anchoring residues are underlined.