Table 2.
ERRα ChIP-on-chip target genes associated with Na+ and/or K+ transport
Gene | Common name | Transport | Peak probe | Location | Bindingsite | ||||
---|---|---|---|---|---|---|---|---|---|
Chr | Start | End | |||||||
Atp1a1 | NaK-ATPase α1 | Na+/K+ | 3 | 101732164 | 101732220 | Intron | TCAAGGTCA | ||
Atp1a3 | NaK-ATPase α3 | Na+/K+ | 7 | 24718010 | 24718054 | Promoter | TGAAGGTCA | ||
Atp1b1 | NaK-ATPase β1 | Na+/K+ | 1 | 166292531 | 166292588 | Intron | cCAAGGgCA | ||
1 | 166293675 | 166293734 | Intron | TTAAGGTCA | |||||
1 | 166295022 | 166295066 | Promoter | AGGTCA | |||||
1 | 166295318 | 166298801 | Promoter | TCAAGGTCA | |||||
1 | 166297763 | 166297820 | Promoter | gGAAGGTCA | |||||
Atp1b2 | NaK-ATPase β2 | Na+/K+ | 11 | 69420940 | 69422229 | Intron | AGGTCA | ||
Bsnd | Barttin | Cl−/K+ | 4 | 105994809 | 105994867 | Promoter | TCAAGGTCA | ||
Fxyd2 | NaK-ATPase γ | Na+/K+ | 9 | 45149761 | 45151240 | Promoter | cCAAGGTCA | ||
9 | 45150607 | 45150651 | Promoter | TCAAGGTCA | |||||
9 | 45152194 | 45152248 | Promoter | cTAAGGTCA | |||||
9 | 45157922 | 45157971 | Intron | TCAAGGTCA | |||||
Hcn3 | — | K+/Na+ | 3 | 89245442 | 89246567 | Intron | — | ||
Kcnc3 | Kv3.3 | K+ | 7 | 44458383 | 44459841 | Promoter | — | ||
Kcnh2 | Kv11.1 | K+ | 5 | 23861900 | 23861944 | Promoter | TAAAGGTCc | ||
Kcnj11 | Kir6.2 | K+ | 7 | 45967896 | 45969085 | Intron | AGGTCA | ||
Kcnj16 | Kir5.1 | K+ | 11 | 110783890 | 110783949 | Promoter | TGAAGGTCA | ||
Kcnq1 | Kv7.1/KvLQT1 | K+ | 7 | 142917727 | 142917784 | Intron | TCAAGGgCA | ||
Kcnq3 | Kv7.3/KvLQT3 | K+ | 15 | 66116269 | 66116313 | Promoter | — | ||
Kctd15 | — | K+ | 7 | 34362551 | 34363715 | Promoter | — | ||
Kctd8 | — | K+ | 5 | 69619598 | 69620713 | Intron | TGAAGGaCA | ||
Scnn1a | αENaC | Na+ | 6 | 125283488 | 125283545 | Promoter | TCAAGGTCA | ||
6 | 125286119 | 125286172 | Promoter | TCAAGGTCA | |||||
6 | 125287189 | 125287233 | Promoter | TAcAGGTCA | |||||
Slc12a6 | KCC3 | Cl−/K+/Na+ | 2 | 112065842 | 112067213 | Promoter | AGGTCA | ||
Slc12a7 | KCC4 | Cl−/K+/Na+ | 13 | 74230441 | 74230485 | Intron | cCAAGGTCA | ||
13 | 74230735 | 74230787 | Intron | TCAAGGTgA |
ATPase, Adenosine triphosphatase; Chr, Chromosome; —, none. Lower case letters represent mismatch from consensus sequence, TNAAGGTCA.