Table V.
Gene | dbSNP | Nucleotide (amino acid) substitutiona | Chromosome: position | MAF (%) | P-value (allele) | Allele OR | 95% CI |
---|---|---|---|---|---|---|---|
RECQL | rs146924988 | A/G (M1T) | 12: 21499569 | 0.3 | 8.57×10−103 | 0.93 | 0.29–3.00 |
ATF7IP2 | rs13335336 | A/G | 16: 10465406 | 17.0 | 3.91×10−93 | 1.15 | 1.00–1.33 |
SHCBP1 | rs11545690 | A/C (M60R) | 16: 46618297 | 5.3 | 3.58×10−76 | 0.87 | 0.67–1.13 |
rs1405262 | T/C | 2: 5994808 | 41.3 | 6.36×10−70 | 0.98 | 0.88–1.10 | |
CAT | rs7943316 | A/T | 11: 34438925 | 33.7 | 1.49×10−53 | 1.02 | 0.91–1.15 |
EXOC6B | rs1517182 | C/A | 2: 72508184 | 1.7 | 8.40×10−52 | 0.91 | 0.59–1.41 |
RNASE10 | rs202109789 | G/A (G87S) | 14: 20510730 | 0.2 | 3.52×10−49 | 1.00 | 0.31–3.25 |
GKN2 | rs146849599 | C/T (V130M) | 2: 68946388 | 2.7 | 6.04×10−49 | 0.82 | 0.57–1.18 |
IGSF10 | rs78090556 | G/A (T981M) | 3: 151447039 | 0.2 | 1.49×10−48 | 2.57 | 1.08–6.25 |
GFM2 | rs77099085 | G/T (H92N) | 5: 74759397 | 6.4 | 5.68×10−46 | 0.93 | 0.74–1.17 |
ADRB2 | rs1042713 | G/A (G16R) | 5: 148826877 | 49.1 | 4.57×10−36 | 1.02 | 0.92–1.15 |
SPN | rs3764276 | C/T | 16: 29661882 | 37.3 | 5.46×10−36 | 1.13 | 1.01–1.26 |
rs3135365 | T/G | 6: 32421478 | 18.9 | 4.03×10−32 | 0.99 | 0.85–1.14 | |
NAA25 | rs12231744 | C/T (R876K) | 12: 112039251 | 35.1 | 1.00×10−30 | 1.14 | 1.02–1.28 |
DNAH11 | rs78763603 | G/A | 7: 21698150 | 15.3 | 3.69×10−24 | 0.99 | 0.85–1.15 |
C15orf57 | rs3803354 | T/C | 15: 40564790 | 8.9 | 6.29×10−24 | 0.92 | 0.76–1.12 |
BDP1 | rs34529158 | C/A (P1669Q) | 5: 71522303 | 0.5 | 3.02×10−23 | 0.94 | 0.44–2.04 |
FLG | rs2184953 | G/A (H2194Y) | 1: 152308306 | 36.2 | 9.10×10−21 | 0.98 | 0.88–1.10 |
rs563694 | T/G | 2: 168917561 | 2.1 | 1.75×10−20 | 1.24 | 0.85–1.79 | |
LOC100996813 | rs2453589 | G/A | 17: 19585538 | 26.0 | 8.53×10−19 | 1.09 | 0.96–1.23 |
DPF3 | rs757572 | T/C | 14: 72665321 | 41.2 | 2.14×10−17 | 1.03 | 0.93–1.16 |
CCDC18 | rs3820059 | G/A (S172F) | 1: 169421916 | 7.1 | 2.24×10−15 | 0.98 | 0.79–1.22 |
rs11624336 | G/A | 14: 96727175 | 14.9 | 1.56×10−14 | 0.99 | 0.84–1.15 | |
AXDND1 | rs41267592 | C/T (T627M) | 1: 179468524 | 0.3 | 1.65×10−14 | 0.62 | 0.19–1.97 |
rs13234712 | G/A | 7: 119939419 | 38.8 | 1.39×10−13 | 0.98 | 0.88–1.10 | |
MAPT | rs3785879 | C/A | 17: 45908270 | 40.8 | 8.89×10−12 | 0.95 | 0.85–1.06 |
NLRP13 | rs17711239 | T/C (N781S) | 19: 55907897 | 9.3 | 1.57×10−11 | 1.05 | 0.87–1.27 |
AIF1 | rs2857697 | A/G | 6: 31617442 | 34.1 | 1.84×10−11 | 1.19 | 1.06–1.34 |
STYK1 | rs138533962 | G/A (R379C) | 12: 10620278 | 2.0 | 3.90×10−11 | 401.7 | 100.0–995.0 |
CCDC169 | rs9546897 | T/C (K120R) | 13: 36254100 | 34.6 | 3.74×10−10 | 1.04 | 0.93–1.16 |
HMHA1 | rs150294461 | G/A (G654E) | 19: 1080682 | 1.4 | 4.63×10−10 | 1.12 | 0.69–1.79 |
TJP3 | rs1046268 | C/T (T898M) | 19: 3750617 | 29.5 | 5.56×10−10 | 1.00 | 0.88–1.13 |
PAX5 | rs2297105 | A/C | 9: 37020625 | 48.3 | 7.69×10−10 | 0.98 | 0.88–1.09 |
rs4996815 | G/T | 13: 105999312 | 12.6 | 8.66×10−10 | 1.03 | 0.88–1.22 | |
HLA-DPB1 | rs9277471 | A/G | 6: 33085905 | 43.6 | 1.55×10−9 | 1.01 | 0.90–1.12 |
SSC4D | rs10227141 | C/T (R505G) | 7: 76390273 | 14.4 | 4.91×10−9 | 0.94 | 0.80–1.10 |
ZCCHC11 | rs138145860 | A/G (I1270T) | 1: 52445800 | 0.2 | 1.04×10−8 | 0.93 | 0.29–2.99 |
MOGAT1 | rs35959734 | G/A (A13T) | 2: 222671822 | 1.2 | 1.11×10−8 | 0.82 | 0.49–1.39 |
rs6534076 | C/T | 4: 118030971 | 38.4 | 1.38×10−8 | 0.96 | 0.85–1.07 | |
SPATC1L | rs113710653 | C/T (E231K) | 21: 46161921 | 1.9 | 3.75×10−8 | 3.64 | 2.43–5.44 |
LRRC17 | rs3800939 | A/G (K119E) | 7: 102934268 | 14.0 | 3.90×10−8 | 0.97 | 0.82–1.13 |
PATE1 | rs2114084 | A/G (Q47R) | 11: 125747715 | 36.4 | 2.19×10−7 | 1.10 | 0.98–1.23 |
LY6G6C | rs117894946 | G/C (G75A) | 6: 31719250 | 9.5 | 2.77×10−7 | 1.06 | 0.88–1.28 |
VWA5B1 | rs139281890 | G/A (R92Q) | 1: 20312971 | 0.2 | 3.26×10−7 | 0.44 | 0.06–3.23 |
PABPC4 | rs4660293 | A/G | 1: 39562508 | 15.2 | 3.99×10−7 | 1.10 | 0.95–1.28 |
ELMO1 | rs11984075 | A/G | 7: 37397251 | 1.1 | 5.49×10−7 | 1.04 | 0.62–1.74 |
C2 | rs511294 | A/C | 6: 31921092 | 0.6 | 7.29×10−7 | 1.20 | 0.63–2.30 |
rs2823962 | G/A | 21: 16673913 | 32.8 | 8.40×10−7 | 0.99 | 0.88–1.11 |
Allele frequencies were analyzed with Fisher's exact test.
Major allele/minor allele. SNPs, single nucleotide polymorphisms; MAF, minor allele frequency; OR, odds ratio; CI, confidence interval.