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. 2016 Mar 25;18(3):479–487. doi: 10.1093/bib/bbw024

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© The Author 2016. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — Visualization of alpha-diversity in tranSMART. The current cohort selection can also be grouped according to a categorical variable. The CONTROL and CD subcohorts were queried independently, and the resulting graphs were put next to each other manually. (A) Example of the individual Shannon indices of 46 samples. (B) Group-wise comparison of Shannon indices. For genotype labels, see text. Screenshots are from tranSMART 1.2 with sysINFLAME extensions and Rausch 2011 data [27]. A colour version of this figure is available at BIB online: https://academic.oup.com/bib.