Table 3.
Alignment of RNA-seq reads from the Wizard cultivar to the CSFL faba bean transcriptome database
Peaks show independent read clustering. Breadth shows the percentage of the unigene model covered, and coverage shows the number of transcripts for which coverages of <10, 10–100, and >100 were obtained. Total shows the total number of unigenes that were present.
| No. of peaks | Breadth | Coverage | Total | ||
|---|---|---|---|---|---|
| <10 | 10–100 | >100 | |||
| 1 | >95% | 3067 | 9169 | 4064 | 16 300 |
| 50–95% | 9677 | 5338 | 1094 | 16 109 | |
| <50% | 4280 | 47 | 2 | 4329 | |
| 2–3 | >95% | 326 | 1515 | 271 | 2112 |
| 50–95% | 4339 | 2976 | 268 | 7583 | |
| <50% | 1198 | 18 | 2 | 1218 | |
| 4–10 | >95% | 14 | 70 | 5 | 89 |
| 50–95% | 1176 | 429 | 17 | 1622 | |
| <50% | 282 | 8 | 0 | 290 | |
| 0% | 0 | ||||
| >10 | >95% | 1 | 0 | 0 | 1 |
| 50–95% | 15 | 1 | 0 | 16 | |
| <50% | 3 | 0 | 0 | 3 | |