Table 1.
Overview of 12 cancer-associated modules.
| Module | PCGs’ counts | Onco-lncRNAs’ counts | Known-function lncRNAs | Module Cancer Pvalue | Functional category |
|---|---|---|---|---|---|
| greenyellow | 178 | 4 | — | 5.6 × 10−14 | cell adhesion |
| tan | 118 | 3 | — | 1.5 × 10−10 | cell cycle |
| black | 242 | 4 | PKI55 | 6.5 × 10−9 | signal transduction |
| cyan | 99 | 8 | FENDRR, MIR22HG, DIO3OS, PCAT19 | 8 × 10−9 | response to immune activity and stimulus |
| yellow | 441 | 12 | FGF14-AS2 | 1.2 × 10−8 | response to immune activity and stimulus |
| brown | 844 | 67 | — | 4.0 × 10−7 | genomic stability |
| lightgreen | 30 | 4 | — | 1.4 × 10−6 | cell cycle |
| blue | 1402 | 41 | PVT1, PCAT6, TINCR, TARID, MIR210HG, MIR503HG | 1.91 × 10−5 | signal transduction |
| red | 288 | 16 | ADAMTS9-AS2, MIR143HG | 3.4 × 10−5 | cell adhesion |
| green | 308 | 7 | — | 3.7 × 10−5 | response to immune activity and stimulus |
| salmon | 109 | 5 | — | 3.7 × 10−5 | cell cycle |
| magenta | 182 | 29 | — | 9.0 × 10−5 | morphogenesis |