Table 1.
Phylogenetic analysis of each ORF in the fosmid f10/17.1H.
| ORF | Length | Hypothetical function | Organism | Phylum/class |
|---|---|---|---|---|
| 1 | 416 | Hypothetical protein | Uncultured Deltaproteobacteria | Deltaproteobacteria |
| 2 | 326 | Thioredoxin | Uncultured Deltaproteobacteria | Deltaproteobacteria |
| 3 | 2072 | Two component system sensor histidine kinase, hybrid | Desulfobacula toluolica | Deltaproteobacteria |
| 4 | 737 | Hypothetical protein | Uliginosibacterium gangwonense | Betaproteobacteria |
| 5 | 311 | Nickel ABC transporter ATP-binding protein | Enterobacter lignolyticus | Gammaproteobacteria |
| 6 | 533 | Chemotaxis protein CheW | Desulfatibacillum alkenivorans | Deltaproteobacteria |
| 7 | 1730 | Fis family transcriptional regulator | Desulfobacter postgatei | Deltaproteobacteria |
| 8 | 1199 | Methyl-accepting chemotaxis sensory transducer | Desulfobacula toluolica | Deltaproteobacteria |
| 9 | 359 | Hypothetical protein | Desulfovibrio alaskensis | Deltaproteobacteria |
| 10 | 419 | Gliding motility protein | Desulfosarcina sp. | Deltaproteobacteria |
| 11 | 680 | CheY-like receiver, AAA-type ATPase and DNA-binding domain | Desulfocapsa sulfexigens | Deltaproteobacteria |
| 12 | 743 | Hypothetical protein | Desulfosarcina sp. | Deltaproteobacteria |
| 13 | 371 | Fis family transcriptional regulator | Desulfonatronospira thiodismutans | Deltaproteobacteria |
| 14 | 1541 | Chemotaxis protein CheA | Desulfonauticus sp. | Deltaproteobacteria |
| 15 | 422 | Fis family transcriptional regulator | Pseudomonas fuscovaginae | Gammaproteobacteria |
| 16 | 524 | CheY-like receiver, AAA-type ATPase and DNA-binding domain | Desulfocapsa sulfexigens | Deltaproteobacteria |
| 17 | 416 | Chemotaxis protein histidine kinase-like kinase | Lawsonia intracellularis | Deltaproteobacteria |
| 18 | 512 | Chemoreceptor glutamine deamidase CheD | Desulfobacula toluolica | Deltaproteobacteria |
| 19 | 398 | Histidine kinase | Desulforegula conservatrix | Deltaproteobacteria |
| 20 | 2216 | Chemotaxis protein A CheA | Desulfobacula toluolica | Deltaproteobacteria |
| 21 | 482 | Chemotaxis protein CheD | Desulforegula conservatrix | Deltaproteobacteria |
| 22 | 428 | Chemotaxis protein CheY | Uncultured Desulfobacterium sp. | Deltaproteobacteria |
| 23 | 353 | Hypothetical protein | Desulfobacterium autotrophicum | Deltaproteobacteria |
| 24 | 1046 | Chemotaxis response regulator protein-glutamate methylesterase | Uncultured Desulfobacterium sp. | Deltaproteobacteria |
| 25 | 824 | CheR-type MCP methyltransferase | Desulfatibacillum alkenivorans | Deltaproteobacteria |
| 26 | 1046 | L-threonine 3-dehydrogenase | Desulfomonile tiedjei | Deltaproteobacteria |
| 27 | 1184 | 2-amino-3-ketobutyrate coenzyme A ligase | Clostridium termitidis | Clostridia |
| 28 | 1232 | NhaP-type Na+ (K+)/H+ antiporter | Thioflavicoccus mobilis | Gammaproteobacteria |
| 29 | 725 | Isochorismatase | Hyphomonas jannaschiana | Alphaproteobacteria |
| 30 | 1271 | 4Fe-4S ferredoxin | Desulfomonile tiedjei | Deltaproteobacteria |
| 31 | 839 | GTP cyclohydrolase | Pandoraea sp. | Betaproteobacteria |
| 32 | 428 | Hypothetical protein | Uncultured Deltaproteobacteria | Deltaproteobacteria |
| 33 | 1019 | Phospholipid/glycerol acyltransferase | Desulfatibacillum alkenivorans | Deltaproteobacteria |
| 34 | 785 | Conserved hypothetical membrane protein | Uncultured Deltaproteobacteria | Deltaproteobacteria |
| 35 | 275 | Hypothetical protein | Polaribacter sp. | Bacteroidetes |
| 36 | 647 | Heme-binding protein | Methylomonas methanica | Gammaproteobacteria |
| 37 | 347 | Hypothetical protein | Uncultured Deltaproteobacteria | Deltaproteobacteria |
| 38 | 1124 | Uncharacterized ATPase | Uncultured bacteria | Unassigned |
| 39 | 761 | Hypothetical protein | Pseudoalteromonas luteoviolacea | Gammaproteobacteria |
| 40 | 506 | Hypothetical protein | Uncultured bacteria | Unassigned |
| 41 | 866 | Hypothetical protein | Thermodesulfobium narugense | Deltaproteobacteria |
| 42 | 245 | Unknown | — | Unassigned |
| 43 | 1127 | TonB-dependent siderophore receptor | — | Unassigned |
| 44 | 302 | Hypothetical protein | Desulfobacula sp. | Deltaproteobacteria |
| 45 | 845 | Unknown | Uncultured Desulfobacterium sp. | Deltaproteobacteria |
| 46 | 989 | Subtilisin-like serine protease | Ignavibacterium album | Bacteroidetes |
The table presents the ORF number, the length in bp, the hypothetical function and the phylogenetic affiliation at both genus and phylum/class levels.