Table 3.
Distribution of the SNPs in resistant and susceptible groups.
| Gene | Locus | Genotype | Resistant | Susceptible | χ 2 (P) | Allele | Resistant | Susceptible | OR (95% CI) | χ 2 (P) |
|---|---|---|---|---|---|---|---|---|---|---|
| NO (%) | NO (%) | NO (%) | NO (%) | |||||||
| Hnrpa | 8975656 T/C | TT | 27 (90.0) | 30 (100.0) | 3.157 (0.075) | T | 54 (90.0) | 60 (100.0) | NA | 6.315 (0.011*) |
| TC | 0 (0.0) | 0 (0.0) | C | 6 (10.0) | 0 (0.0) | |||||
| CC | 3 (10.0) | 0 (0.0) | HWE | 7.06E −7 | 1.000 | |||||
| Yes | 11446782 A/G | AA | 3 (10.0) | 5 (16.7) | 1.731 (0.421) | A | 25 (41.7) | 24 (40.0) | 1.071 (0.517–2.219) | 0.034 (0.853) |
| AG | 19 (63.3) | 14 (46.7) | G | 35 (58.3) | 36 (60.0) | |||||
| GG | 8 (26.7) | 11 (36.7) | HWE | 0.097 | 0.879 | |||||
| Gsto | 12133107 A/G | AA | 7 (23.3) | 7 (23.3) | 0.138 (0.933) | A | 33 (55.0) | 32 (53.3) | 1.069 | 0.034 (0.855) |
| AG | 19 (63.3) | 18 (60.0) | G | 27 (45.0) | 28 (46.7) | |||||
| GG | 4 (13.3) | 5 (16.7) | HWE | 0.126 | 0.261 | |||||
| C7N1 | 4807309 A/G | AA | 3 (10.0) | 4 (13.3) | 8.174 (0.017*) | A | 30 (50.0) | 22 (36.7) | 1.727 (0.833–3.582) | 2.172 (0.141) |
| AG | 24 (80.0) | 14 (46.7) | G | 30 (50.0) | 38 (63.3) | |||||
| GG | 3 (10.0) | 12 (40.0) | HWE | 0.001 | 0.979 | |||||
| Napi-llb2 | 6436410 A/G | AA | 1 (3.3) | 1 (3.3) | 5.612 (0.060) | A | 11 (18.3) | 20 (33.3) | 0.448 (0.192–1.046) | 3.523 (0.060) |
| AG | 9 (30.0) | 18 (60.0) | G | 49 (81.7) | 40 (66.7) | |||||
| GG | 20 (66.7) | 11 (36.7) | HWE | 0.999 | 0.159 | |||||
| Chsg | 1260503 A/G | AA | 0 (0.0) | 0 (0.0) | 0.077 (0.781) | A | 10 (17.2) | 9 (15.0) | 1.133 (0.424–3.023) | 0.062 (0.802) |
| AG | 10 (33.3) | 9 (30.0) | G | 48 (82.8) | 51 (85.0) | |||||
| GG | 20 (66.7) | 21 (70.0) | HWE | 0.544 | 0.610 |
Note: *The distributions of corresponding SNPs between resistant and susceptible groups are significantly different (P < 0.05). ‘NA’ indicates not available. P values for HWE test are shown with boldface.