Table 2.
Differentially expressed genes (DEGs) and related enriched categories from GO analysis in response to nitrogen stress.
| Tissue | up/down | DEGs | Filtered DEGs (log2FC) | GO enriched | Filtered GO (FDR) |
|---|---|---|---|---|---|
| leaves/stems | up | 966 | 377 | 275 | 32 |
| down | 904 | 586 | 566 | 186 | |
| flag leaf | up | 206 | 144 | 156 | 9 |
| down | 349 | 326 | 339 | 87 | |
| spike | up | 64 | 60 | 71 | 25 |
| down | 295 | 295 | 462 | 217 | |
| roots | up | 2331 | 1411 | 754 | 114 |
| down | 2340 | 1859 | 750 | 129 |
Number of total DEGs and number of DEGs filtered by log base 2 of the fold change (log2FC ≥ |1.5|) are shown. For each set of up- or downregulated genes, total GO categories identified from the enrichment analysis, and GO filtered by false discovery rate (FDR ≤ 0.05) are presented.