Table 2.
Name | Sequence[1] | MW[2] | Charge[3] | IP [pH] | GRAVY[4] | composition[5] |
---|---|---|---|---|---|---|
AMP1 | YRLRVKWKW | 1338.64 | 5 | 12.2 | −1.322 | π+α+α+π+π |
AMP2 | KRRWRIWLV | 1316.64 | 5 | 14 | −0.744 | +++π+απαα |
AMP3 | RTKKWIVWI | 1232.54 | 4 | 14 | −0.178 | +ο++πααπα |
AMP4 | RRRIKIRWY | 1351.67 | 6 | 12.6 | −0.678 | +++α+α+ππ |
AMP5 | WRKFWKYLK | 1358.67 | 5 | 11.7 | −1.411 | π++ππ+πα+ |
[1]N-term: free amine; C-term: carboxamide, [2]Molecular weight [g/mol], [3]Net charge at pH 7 [4]Grand average of hydrophathicity (calculated using online software http://web.expasy.org/protparam)[5]+ basic; ο polar;π aromatic; α aliphatic.