Table 3.
Identified B. napus cyclophilins by RNA-Seq and LC-MS/MS.
| Name | Gene Name | BnCYPs identified by RNA-Seq | BnCYPs identified by LC-MS/MS | |
|---|---|---|---|---|
| Leaf | Phloem | |||
| BnCYP5 | BnaA01g25420D | |||
| BnCYP7-1 | BnaA09g37110D | |||
| BnCYP7-2 | BnaA01g36790D | |||
| BnCYP7-3 | BnaA01g36800D | |||
| BnCYP8 | BnaCnng42430D | x | ||
| BnCYP10-1 | BnaC02g14160D | |||
| BnCYP10-2 | BnaC06g10280D | |||
| BnCYP12-1 | BnaC02g10590D | |||
| BnCYP12-2 | BnaAnng41240D | x | ||
| BnCYP13 | BnaA02g07550D | x | x | |
| BnCYP14-1 | BnaC04g41450D | x | ||
| BnCYP14-2 | BnaC04g41430D | x | ||
| BnCYP14-3 | BnaC04g41440D | x | ||
| BnCYP14-4 | BnaC08g28870D | |||
| BnCYP14-5 | BnaC09g34640D | |||
| BnCYP14-6 | BnaA01g25470D | |||
| BnCYP16 | BnaA02g10200D | |||
| BnCYP17-1 | BnaA01g25460D | |||
| BnCYP18-1 | BnaA05g08140D | x | x | |
| BnaC04g09170D | x | |||
| BnCYP18-2 | BnaC01g03590D | x | x | |
| BnCYP18-3 | BnaA01g02340D | x | ||
| BnCYP18-4 | BnaC03g60160D | x | x | x |
| BnaA08g16920D | x | |||
| BnCYP18-5 | BnaA09g08780D | x | x | x |
| BnCYP18-6 | BnaA06g37360D | x | x | |
| BnCYP18-7 | BnaC07g47630D | x | x | |
| BnCYP18-8 | BnaC09g09060D | x | ||
| BnCYP19-1 | BnaA09g35540D | x | x | |
| BnCYP19-2 | BnaC08g26990D | x | x | x |
| BnCYP20 | BnaA01g36700D | |||
| BnCYP21-1 | BnaCnng08980D | x | x | |
| BnCYP21-2 | BnaC04g06640D | x | ||
| BnCYP21-3 | BnaAnng15590D | x | x | x |
| BnCYP21-4 | BnaC03g12390D | x | x | |
| BnCYP21-5 | BnaC04g54560D | x | ||
| BnCYP21-6 | BnaAnng17350D | x | ||
| BnCYP21-7 | BnaA05g06380D | x | ||
| BnCYP21-8 | BnaC04g45890D | x | ||
| BnCYP21-9 | BnaA10g29520D | x | x | |
| BnaC09g34020D | x | |||
| BnCYP22-1 | BnaCnng32070D | |||
| BnCYP22-2 | BnaA04g22160D | x | x | |
| BnCYP22-3 | BnaC04g41460D | x | ||
| BnCYP24-1 | BnaC08g26840D | x | x | |
| BnCYP24-2 | BnaA09g35470D | x | ||
| BnCYP24-3 | BnaA10g12350D | |||
| BnCYP24-4 | BnaA08g10930D | x | ||
| BnCYP24-5 | BnaC01g03530D | x | ||
| BnCYP24-6 | BnaA01g02260D | x | ||
| BnCYP24-7 | BnaC03g65620D | x | ||
| BnCYP25-1 | BnaA08g20010D | x | ||
| BnCYP25-2 | BnaC08g48540D | x | ||
| BnCYP25-3 | BnaA09g29400D | x | ||
| BnCYP25-4 | BnaA03g21710D | x | ||
| BnCYP25-5 | BnaC03g25990D | x | ||
| BnCYP26-1 | BnaA05g30740D | x | ||
| BnCYP26-2 | BnaA08g08200D | x | ||
| BnCYP26-3 | BnaC05g45190D | x | ||
| BnCYP26-4 | BnaA04g17840D | x | ||
| BnCYP26-5 | BnaCnng32180D | x | ||
| BnCYP27-1 | BnaC05g44950D | |||
| BnCYP27-2 | BnaC08g31970D | x | x | x |
| BnCYP27-3 | BnaC03g05790D | x | x | x |
| BnCYP27-4 | BnaA09g39610D | x | x | x |
| BnCYP27-5 | BnaA03g04200D | x | ||
| BnCYP28-1 | BnaA04g27460D | x | x | x |
| BnCYP28-2 | BnaC04g21530D | x | x | |
| BnCYP30-1 | BnaC08g08050D | x | x | |
| BnCYP30-2 | BnaA08g07170D | x | ||
| BnCYP31 | BnaC07g00280D | |||
| BnCYP34-1 | BnaC02g22620D | x | x | |
| BnCYP34-2 | BnaA02g16680D | x | ||
| BnCYP37-1 | BnaC01g21230D | x | ||
| BnCYP37-2 | BnaA01g17950D | x | ||
| BnCYP40-1 | BnaC07g05260D | x | ||
| BnCYP40-2 | BnaA07g04040D | x | ||
| BnCYP47-1 | BnaC08g10870D | x | ||
| BnCYP47-2 | BnaA05g33830D | x | x | |
| BnCYP47-3 | BnaC05g48850D | x | ||
| BnCYP49 | BnaA05g24020D | x | x | |
| BnCYP50 | BnaC05g38110D | x | ||
| BnCYP52 | BnaC01g05170D | x | ||
| BnCYP55 | BnaA01g03810D | x | ||
| BnCYP62 | BnaAnng12550D | x | x | |
| BnCYP65-1 | BnaA06g24990D | x | ||
| BnCYP65-2 | BnaC03g48580D | x | ||
| BnCYP67 | BnaC04g20680D | x | ||
| BnCYP70-1 | BnaC03g54740D | x | ||
| BnCYP70-2 | BnaA06g18830D | x | ||
| BnCYP86-1 | BnaA01g04590D | x | ||
| BnCYP86-2 | BnaC01g06080D | x | x | |
| BnCYP112 | BnaC03g71020D | x | ||
| BnCYP146 | BnaA03g29520D | x | ||