Table 1.
Major bin-genomes reconstructed from the PF and BF samples in reactor 1.
| Taxonomya | Bin ID | Frequencyb (%) | Length (Mbp) | No. of CDS | No. of contigs | Estimated Completenessc (%) | |
|---|---|---|---|---|---|---|---|
| PF | BF | ||||||
| Methanogenic archaea | |||||||
| Methanosarcina | Mes1 | 0.1 | 33.9 | 3.20 | 2772 | 1 | 99 |
| Methanothermobacter | Met2 | 3.3 | 23.9 | 1.52 | 1604 | 1 | 98 |
| Methanothermobacter | Met7 | 0.4 | 1.1 | 1.50 | 1651 | 8 | 97 |
| Methanothermobacter | Met20 | 0.03 | 0.2 | 1.56 | 1678 | 25 | 99 |
| Bacteria | |||||||
| Coprothermobacter | Cop3 | 25.6 | 15.0 | 0.97 | 1146 | 226 | 91 |
| Coprothermobacter | Cop4 | 14.8 | 8.2 | 1.31 | 1500 | 266 | 84 |
| Anaerobaculum | Anb5 | 6.9 | 6.4 | 1.50 | 1538 | 147 | 95 |
| Clostridium III | Clo6 | 11.3 | 1.3 | 3.40 | 3229 | 199 | 92 |
| Syntrophaceticus | Syn8 | 0.3 | 1.0 | 2.04 | 2075 | 116 | 95 |
| Clostridia | Clo9 | 2.7 | 1.2 | 3.20 | 2848 | 222 | 94 |
| Lutispora | Lut10 | 3.2 | 0.8 | 2.11 | 2086 | 192 | 93 |
aTaxonomic positions assigned by RDP classifier with a confidence threshold of 80%.
bCalculated based on RPKM values of PF and BF reads for each bin-genome.
cEstimated based on the frequency of universal single-copy genes (136 genes for archaea and 105 genes for bacteria) in each bin-genome.