Table 2.
n | N | h | π (%) | g | Tajima’s D | Fu’s Fs | SSD | Raggedness | |
---|---|---|---|---|---|---|---|---|---|
Western lineage | 70 | 14 | 0.877 (0.018) | 0.54 (0.03) | 90.811 (13.787) | 0.495 | −0.414 | 0.020 | 0.037 |
Eastern lineage | 195 | 21 | 0.732 (0.028) | 0.27 (0.02) | 200.950 (16.072) | −1.494* | −7.738* | 0.012 | 0.040 |
QLC | 16 | 2 | 0.125 (0.106) | 0.02 (0.01) | NA | −1.162 | −0.700 | 0.042 | 0.578 |
Total | 281 | 37 | 0.861 (0.016) | 2.42 (0.21) | −46.661 (2.851) | 0.314 | 6.996 | 0.033 | 0.016 |
Standard deviation of h, π and g estimates are shown in parentheses. n, the number of individuals; N, the number of haplotypes; h, haplotype diversity; π, nucleotide diversity; g, population growth parameter; SSD, sum of square deviation (goodness-of-fit to a simulated population expansion); Raggedness, raggedness index; NA, not applicable.